Factsheet for TraesCS5D01G138000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G130400.1	Wheat	plastid	97.0	96.74
TraesCS5A01G130500.1	Wheat	plastid	96.19	95.66
TraesCS5B01G129200.1	Wheat	plastid	95.64	95.64
HORVU5Hr1G041290.4	Barley	cytosol, nucleus, peroxisome	93.46	91.96
Os11t0149100-01	Rice	cytosol, nucleus, peroxisome	77.38	77.6
EES15662	Sorghum	cytosol, nucleus, peroxisome	71.66	73.88
Zm00001d052495_P001	Maize	cytosol, nucleus, peroxisome	70.84	73.65
EES07975	Sorghum	cytosol	71.66	72.65
Os12t0147000-00	Rice	nucleus	72.75	70.08
Zm00001d004924_P001	Maize	cytosol	68.12	69.83
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	38.69	42.26
GSMUA_Achr2P20250_001	Banana	cytosol, peroxisome, plastid	38.69	38.69
GSMUA_Achr6P13410_001	Banana	cytosol, nucleus, peroxisome	38.15	38.25
VIT_08s0007g04020.t01	Wine grape	nucleus	37.33	37.95
TraesCS5D01G274900.1	Wheat	plastid	28.61	35.84
KRH20019	Soybean	nucleus	34.06	32.98
TraesCS7D01G247300.2	Wheat	mitochondrion, nucleus, peroxisome, plastid	31.88	31.62
KRH32644	Soybean	plastid	33.24	30.81
TraesCS2D01G448900.1	Wheat	cytosol, nucleus, peroxisome, plastid	34.33	30.58
PGSC0003DMT400007056	Potato	nucleus	32.7	29.56
TraesCS7D01G312100.1	Wheat	plastid	31.88	29.47
KRH25156	Soybean	cytosol	20.71	29.23
Solyc09g008940.2.1	Tomato	nucleus	32.7	28.78
GSMUA_Achr3P03040_001	Banana	nucleus, peroxisome, plasma membrane	36.78	27.89
TraesCS6D01G076900.1	Wheat	nucleus	28.88	26.77
TraesCS1D01G194900.2	Wheat	nucleus	32.15	25.99
TraesCS7D01G133700.1	Wheat	cytosol	15.8	25.22
KRH30520	Soybean	nucleus	24.8	24.59
TraesCS2D01G597900.1	Wheat	cytosol, nucleus, plasma membrane, plastid	26.7	24.2
TraesCS7D01G134100.1	Wheat	nucleus	21.25	21.55
TraesCS5D01G274800.1	Wheat	cytosol	0.82	2.56

Protein Annotations

EnsemblPlants:TraesCS5D01G138000.1	EnsemblPlantsGene:TraesCS5D01G138000	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom	PANTHER:PTHR31500
PANTHER:PTHR31500:SF24	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856	TIGR:cd11378
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:219524352..219526498

Molecular Weight (calculated)

37557.5 Da

IEP (calculated)

9.188

GRAVY (calculated)

-0.258

Length

367 amino acids

Sequence
(BLAST)

001: MEGRVGIAVA GGHEAGLGLF RADVSMAEPQ GAAKVEYRSS PSSPSTSPTP SPPQAAAGHG GGYAAATPHA WSFAGEQEKP TEARAGDNGN GNGMQMAGDG
101: EQVAGLSSGR RRGRPRGSGR RQILATLGEW YALSAGGSFT PHVIIVPARE DVAARIMSFS QRGPRSVCIL AASGTISNVA FNKPGSSGSS DSTFTYEGLF
201: EILQLTGSFT MAEEGGRKRT GGLSVSLAGP DGRVIGGVVA GMLRAATPIQ VIVGSFLPNS LKQHQRRMGM HPQPSAVPTP PEADAPPPVL TAAMPISQAA
301: PGNGRHGPPV PMAPLQVHAN VEHTATTGPM NLNSSSAGFT MVGWPVGAQP MGHRPSPDIN LCLTPQE

Best Arabidopsis Sequence Match ( AT4G12080.1 )
(BLAST)

001: MVLNMESTGE AVRSTTGNDG GITVVRSDAP SDFHVAQRSE SSNQSPTSVT PPPPQPSSHH TAPPPLQIST VTTTTTTAAM EGISGGLMKK KRGRPRKYGP
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT

Arabidopsis Description

AHL1ATAHL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V7H8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.