Factsheet for GSMUA_Achr2P20250_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P13410_001	Banana	cytosol, nucleus, peroxisome	62.94	63.11
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	57.22	62.5
GSMUA_Achr3P03040_001	Banana	nucleus, peroxisome, plasma membrane	74.66	56.61
GSMUA_Achr5P03370_001	Banana	mitochondrion, plastid	24.25	46.84
VIT_08s0007g04020.t01	Wine grape	nucleus	45.5	46.26
GSMUA_Achr7P20540_001	Banana	nucleus	35.97	45.05
GSMUA_Achr1P03070_001	Banana	cytosol, extracellular, nucleus	23.71	44.39
GSMUA_Achr5P20630_001	Banana	nucleus, plasma membrane, plastid	38.96	42.94
GSMUA_Achr7P06500_001	Banana	cytosol, plasma membrane, plastid	38.96	42.56
GSMUA_Achr6P03420_001	Banana	nucleus	41.42	42.22
GSMUA_Achr3P03710_001	Banana	nucleus	41.42	41.64
Zm00001d052495_P001	Maize	cytosol, nucleus, peroxisome	40.05	41.64
Zm00001d004924_P001	Maize	cytosol	39.78	40.78
GSMUA_Achr8P11400_001	Banana	nucleus	38.42	40.75
EES15662	Sorghum	cytosol, nucleus, peroxisome	39.51	40.73
Os11t0149100-01	Rice	cytosol, nucleus, peroxisome	40.33	40.44
KRH20019	Soybean	nucleus	41.69	40.37
GSMUA_Achr4P27240_001	Banana	cytosol, extracellular, nucleus, plastid	38.69	40.34
EES07975	Sorghum	cytosol	39.51	40.06
GSMUA_Achr1P19840_001	Banana	nucleus	41.42	39.9
TraesCS5B01G130400.1	Wheat	plastid	38.96	38.86
Os12t0147000-00	Rice	nucleus	40.33	38.85
TraesCS5D01G138000.1	Wheat	plastid	38.69	38.69
TraesCS5A01G130500.1	Wheat	plastid	38.69	38.48
KRH32644	Soybean	plastid	41.42	38.38
GSMUA_Achr9P12360_001	Banana	extracellular, vacuole	42.51	38.33
GSMUA_Achr11P...	Banana	nucleus	38.69	38.27
TraesCS5B01G129200.1	Wheat	plastid	38.15	38.15
GSMUA_Achr11P...	Banana	nucleus	38.96	38.13
GSMUA_Achr4P30000_001	Banana	nucleus	33.79	38.04
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	39.51	37.96
HORVU5Hr1G041290.4	Barley	cytosol, nucleus, peroxisome	38.42	37.8
GSMUA_Achr2P09840_001	Banana	nucleus	36.24	37.25
GSMUA_Achr2P03170_001	Banana	cytosol, peroxisome, plasma membrane	37.87	35.64
GSMUA_Achr5P23820_001	Banana	cytosol, nucleus, plasma membrane	40.87	35.63
PGSC0003DMT400007056	Potato	nucleus	38.69	34.98
Solyc09g008940.2.1	Tomato	nucleus	39.24	34.53
KRH25156	Soybean	cytosol	21.8	30.77
KRH30520	Soybean	nucleus	28.34	28.11

Protein Annotations

EnsemblPlants:GSMUA_Achr2P20250_001	EnsemblPlants:GSMUA_Achr2T20250_001	EnsemblPlantsGene:GSMUA_Achr2G20250_001	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31500	PANTHER:PTHR31500:SF14	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856
UniParc:UPI000296478F	UniProt:M0S9L6	MapMan:35.1	:	:	:

Description

Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr2G20250_001]

Coordinates

chr2:+:20114000..20119595

Molecular Weight (calculated)

37942.0 Da

IEP (calculated)

9.291

GRAVY (calculated)

-0.291

Length

367 amino acids

Sequence
(BLAST)

001: MSENNHYCTC RQPFPAFFPP SPSPTPSLQP EAFPGVVSGV TEMAVPPAEG AGLAMGVLGS GGGGSGGSSG GDLFGRKKRG RPRKYGPDGM ALALTPTSGS
101: PISPVFSDGK RGRGRPPGSG KYQILAALGE WFAYSAGGNF TPHVVTIATG EDVSARILSF SRKGPRSICI LSANGAISNV TLRQPGSSGG TLTYEMRRGL
201: RQNLECKLVV REGRFEILSL SGSFTITENG GVRSRTGGIS VSLAGPDGRV IGGGVAGLLL AASPIQVVVG SFMPNTFKEQ KPKPIQQATS PSFPATTGLL
301: TAARPVSQAN PEDECETPTS SLPGQSHAEN SMHNPTPNPT LHAPGWHGLQ SSEHKPSPDI NICLQGE

Best Arabidopsis Sequence Match ( AT2G33620.1 )
(BLAST)

001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K

Arabidopsis Description

AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.