Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07975 | Sorghum | cytosol | 91.22 | 88.95 |
| Zm00001d004924_P001 | Maize | cytosol | 85.55 | 84.36 |
| Os11t0149100-01 | Rice | cytosol, nucleus, peroxisome | 79.6 | 76.78 |
| TraesCS5B01G130400.1 | Wheat | plastid | 74.22 | 71.2 |
| TraesCS5D01G138000.1 | Wheat | plastid | 73.65 | 70.84 |
| TraesCS5A01G130500.1 | Wheat | plastid | 73.65 | 70.46 |
| HORVU5Hr1G041290.4 | Barley | cytosol, nucleus, peroxisome | 74.22 | 70.24 |
| TraesCS5B01G129200.1 | Wheat | plastid | 72.52 | 69.75 |
| Os12t0147000-00 | Rice | nucleus | 74.22 | 68.77 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 40.79 | 42.86 |
| Zm00001d015090_P001 | Maize | extracellular | 30.59 | 40.75 |
| GSMUA_Achr2P20250_001 | Banana | cytosol, peroxisome, plastid | 41.64 | 40.05 |
| GSMUA_Achr6P13410_001 | Banana | cytosol, nucleus, peroxisome | 40.79 | 39.34 |
| VIT_08s0007g04020.t01 | Wine grape | nucleus | 39.94 | 39.06 |
| KRH20019 | Soybean | nucleus | 39.09 | 36.41 |
| Zm00001d020951_P002 | Maize | cytosol, nucleus, peroxisome, plastid | 32.29 | 34.03 |
| Zm00001d052901_P002 | Maize | nucleus | 35.13 | 33.6 |
| KRH32644 | Soybean | plastid | 37.68 | 33.59 |
| Zm00001d026036_P001 | Maize | nucleus | 36.26 | 31.84 |
| PGSC0003DMT400007056 | Potato | nucleus | 35.98 | 31.28 |
| KRH25156 | Soybean | cytosol | 22.95 | 31.15 |
| Solyc09g008940.2.1 | Tomato | nucleus | 36.26 | 30.7 |
| Zm00001d037425_P001 | Maize | nucleus | 30.88 | 30.53 |
| Zm00001d018515_P002 | Maize | nucleus | 33.43 | 30.41 |
| Zm00001d006034_P003 | Maize | nucleus | 36.83 | 30.23 |
| Zm00001d030053_P003 | Maize | plastid | 35.69 | 30.22 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 32.86 | 29.67 |
| Zm00001d031481_P001 | Maize | nucleus, peroxisome, plasma membrane, plastid | 34.28 | 29.37 |
| Zm00001d047042_P004 | Maize | cytosol, nucleus, plasma membrane | 35.13 | 28.9 |
| Zm00001d051861_P001 | Maize | endoplasmic reticulum, nucleus, plastid | 32.58 | 28.75 |
| GSMUA_Achr3P03040_001 | Banana | nucleus, peroxisome, plasma membrane | 39.09 | 28.51 |
| KRH30520 | Soybean | nucleus | 26.06 | 24.86 |
| Zm00001d026652_P001 | Maize | plastid | 26.63 | 23.68 |
| Zm00001d001784_P002 | Maize | nucleus | 27.76 | 22.53 |
| Zm00001d020950_P001 | Maize | cytosol | 0.85 | 2.56 |
Protein Annotations
| EMBL:BT069427 | EMBL:EU966902 | EnsemblPlants:Zm00001d052495_P001 | EnsemblPlants:Zm00001d052495_T001 | EnsemblPlantsGene:Zm00001d052495 | EntrezGene:100217167 |
| Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 | PANTHER:PTHR31500:SF24 | PFAM:PF03479 |
| PFscan:PS51742 | ProteinID:AQK57348.1 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI000182E1F5 | UniProt:B6TPI7 |
| MapMan:35.1 | : | : | : | : | : |
Description
AT-hook motif nuclear-localized protein 1
Coordinates
chr4:+:191453257..191461522
Molecular Weight (calculated)
36135.8 Da
IEP (calculated)
10.226
GRAVY (calculated)
-0.235
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MQMEGREGIA VGRESGHGSM FRAADIAMAE AQEAAAKGYQ SSPSSPSTSP TPSPPAAAAG HAGDAAATPL AWSLGGETPS GAVVVDNGTQ TAGQSEHASL
101: SSGRRRGRPR GSGRRQILAT LGEWYALSAG GSFTPHVIIV GTGEDVAARI MSFSQKGPRS VCILSANGSI SNVTLRQPDA SGSTFTYEGR FEILQLMGSF
201: TMAEEGRRRT GGLSVSLAGP DGRVVGGVVA GMLRAASPIQ VIVGSFLPNS LKQHQRRRMS MQQPSPVPAL PAPVAPPPPV LTAATPISQA GPGNGFHAPP
301: PPHSAAPPQP HANAMNLNAT TTGFTMVGWP ASSPQPMAYR ASPDINVSLT PQE
101: SSGRRRGRPR GSGRRQILAT LGEWYALSAG GSFTPHVIIV GTGEDVAARI MSFSQKGPRS VCILSANGSI SNVTLRQPDA SGSTFTYEGR FEILQLMGSF
201: TMAEEGRRRT GGLSVSLAGP DGRVVGGVVA GMLRAASPIQ VIVGSFLPNS LKQHQRRRMS MQQPSPVPAL PAPVAPPPPV LTAATPISQA GPGNGFHAPP
301: PPHSAAPPQP HANAMNLNAT TTGFTMVGWP ASSPQPMAYR ASPDINVSLT PQE
001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
Arabidopsis Description
AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.