Factsheet for Zm00001d001784_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 1
cytosol 1
plastid 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001784_P002
Zm00001d009549_P002
Zm00001d010797_P001
Zm00001d012691_P001
Zm00001d012772_P001
Zm00001d012773_P003
Zm00001d015090_P001
Zm00001d018515_P002
Zm00001d026036_P001
Zm00001d026652_P001
Zm00001d030053_P003
Zm00001d036213_P002
Zm00001d038783_P001
Zm00001d038989_P002
Zm00001d043383_P001
Zm00001d043523_P001
Zm00001d043889_P001
Zm00001d047042_P004
Zm00001d051861_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G63480.1	Zm00001d001784_P002	AT3G61310.1	21798944
AT1G63480.1	Zm00001d018515_P002	AT3G61310.1	21798944
AT1G63480.1	Zm00001d026652_P001	AT3G61310.1	21798944
AT1G63480.1	Zm00001d051861_P001	AT3G61310.1	21798944
AT1G63480.1	Zm00001d010797_P001	AT5G56600.1	21798944
AT1G63480.1	Zm00001d012772_P001	AT5G56600.1	21798944
AT1G63480.1	Zm00001d012773_P003	AT5G56600.1	21798944
AT1G63480.1	Zm00001d036213_P002	AT5G56600.1	21798944
AT1G63480.1	Zm00001d038783_P001	AT5G56600.1	21798944
AT1G63480.1	Zm00001d043523_P001	AT5G56600.1	21798944
AT2G45850.1	Zm00001d015090_P001	AT4G12080.1	21798944
AT2G45850.1	Zm00001d026036_P001	AT4G17950.1	21798944
AT2G45850.1	Zm00001d030053_P003	AT4G17950.1	21798944
AT2G45850.1	Zm00001d047042_P004	AT4G17950.1	21798944
AT3G61310.1	Zm00001d009549_P002	AT1G52240.1	21798944
AT3G61310.1	Zm00001d012691_P001	AT1G52240.1	21798944
AT3G61310.1	Zm00001d038989_P002	AT1G52240.1	21798944
AT3G61310.1	Zm00001d043383_P001	AT1G52240.1	21798944
AT3G61310.1	Zm00001d043889_P001	AT1G52240.1	21798944
AT3G61310.1	Zm00001d001784_P002	AT2G45850.1	21798944
AT3G61310.1	Zm00001d018515_P002	AT2G45850.1	21798944
AT3G61310.1	Zm00001d026652_P001	AT2G45850.1	21798944
AT3G61310.1	Zm00001d051861_P001	AT2G45850.1	21798944
AT3G61310.1	Zm00001d001784_P002	AT3G61310.1	21798944
AT3G61310.1	Zm00001d018515_P002	AT3G61310.1	21798944
AT3G61310.1	Zm00001d026652_P001	AT3G61310.1	21798944
AT3G61310.1	Zm00001d051861_P001	AT3G61310.1	21798944
AT3G61310.1	Zm00001d015090_P001	AT4G12080.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG27470	Sorghum	nucleus	80.0	83.25
Zm00001d026652_P001	Maize	plastid	74.48	81.61
HORVU2Hr1G123730.3	Barley	plastid	36.78	76.19
Os04t0683900-01	Rice	nucleus	65.06	67.54
TraesCS2A01G582300.1	Wheat	nucleus	61.15	65.84
TraesCS2B01G604700.1	Wheat	nucleus	59.54	64.27
TraesCS2D01G597900.1	Wheat	cytosol, nucleus, plasma membrane, plastid	59.77	64.2
GSMUA_Achr5P20630_001	Banana	nucleus, plasma membrane, plastid	29.66	38.74
VIT_15s0046g02930.t01	Wine grape	nucleus, plastid	30.57	38.55
KRH00715	Soybean	nucleus	29.2	37.13
KRH40471	Soybean	nucleus	28.97	36.95
KRH65066	Soybean	nucleus	28.51	36.47
KRH48165	Soybean	nucleus	28.51	36.47
GSMUA_Achr8P11400_001	Banana	nucleus	28.74	36.13
KRH05193	Soybean	plastid	12.18	36.05
GSMUA_Achr4P30000_001	Banana	nucleus	26.9	35.89
GSMUA_Achr1P03070_001	Banana	cytosol, extracellular, nucleus	15.86	35.2
Solyc08g080960.2.1	Tomato	nucleus	26.9	35.03
VIT_02s0025g03580.t01	Wine grape	nucleus	27.59	34.68
GSMUA_Achr11P...	Banana	nucleus	29.66	34.4
CDY42495	Canola	nucleus	26.67	34.32
Bra014444.1-P	Field mustard	nucleus	26.21	34.23
GSMUA_Achr11P...	Banana	nucleus	29.2	34.23
Solyc01g094460.2.1	Tomato	nucleus	26.67	34.22
CDX89109	Canola	nucleus	25.98	33.73
PGSC0003DMT400000467	Potato	nucleus	25.98	33.33
CDY51561	Canola	nucleus	25.98	33.24
CDY58791	Canola	nucleus	25.06	33.23
CDY48928	Canola	nucleus	26.21	33.14
CDY37070	Canola	nucleus	25.98	33.14
Bra007595.1-P	Field mustard	nucleus	25.98	33.14
Solyc08g008030.2.1	Tomato	nucleus	26.21	32.95
CDX71746	Canola	nucleus	25.98	32.85
AT2G45850.1	Thale cress	nucleus	26.21	32.76
PGSC0003DMT400014926	Potato	plastid	25.98	32.75
Bra039309.1-P	Field mustard	nucleus	25.52	32.55
CDY27354	Canola	nucleus	25.98	32.38
Zm00001d018515_P002	Maize	nucleus	28.74	32.22
KRH27929	Soybean	nucleus	25.52	31.53
AT3G61310.1	Thale cress	nucleus, plastid	25.29	31.07
Bra003446.1-P	Field mustard	nucleus	24.14	30.97
Zm00001d052901_P002	Maize	nucleus	26.21	30.89
KRH77536	Soybean	nucleus	25.29	30.81
Zm00001d051861_P001	Maize	endoplasmic reticulum, nucleus, plastid	28.28	30.75
KRH41165	Soybean	nucleus	24.83	30.68
Zm00001d020951_P002	Maize	cytosol, nucleus, peroxisome, plastid	23.45	30.45
KRH59866	Soybean	nucleus	24.6	30.4
CDY25500	Canola	nucleus	25.75	30.27
PGSC0003DMT400031843	Potato	plastid	26.44	29.95
AT1G63470.1	Thale cress	nucleus	25.52	29.37
Bra025511.1-P	Field mustard	nucleus	18.62	29.24
CDY45364	Canola	nucleus	24.6	29.16
Bra027642.1-P	Field mustard	nucleus	25.52	29.13
Zm00001d037425_P001	Maize	nucleus	23.91	29.13
CDY64088	Canola	nucleus, plasma membrane, plastid	24.14	29.01
Bra027801.1-P	Field mustard	nucleus	24.83	28.8
CDY34355	Canola	nucleus	24.6	28.31
Zm00001d026036_P001	Maize	nucleus	25.75	27.86
Zm00001d052495_P001	Maize	cytosol, nucleus, peroxisome	22.53	27.76
AT1G63480.1	Thale cress	nucleus	22.76	27.42
Zm00001d030053_P003	Maize	plastid	26.21	27.34
Zm00001d047042_P004	Maize	cytosol, nucleus, plasma membrane	26.21	26.57
Zm00001d004924_P001	Maize	cytosol	21.84	26.54
Zm00001d031481_P001	Maize	nucleus, peroxisome, plasma membrane, plastid	25.06	26.46
Zm00001d049661_P001	Maize	cytosol, peroxisome, plasma membrane	23.68	26.34
Zm00001d015090_P001	Maize	extracellular	15.86	26.04
Zm00001d006034_P003	Maize	nucleus	25.52	25.81
CDY46385	Canola	nucleus	20.92	23.82
CDY39751	Canola	nucleus	20.92	23.82
Zm00001d020950_P001	Maize	cytosol	0.46	1.71

Protein Annotations

EnsemblPlants:Zm00001d001784_P002	EnsemblPlants:Zm00001d001784_T002	EnsemblPlantsGene:Zm00001d001784	EntrezGene:100194172	Gene3D:3.30.1330.80	InterPro:IPR005175
InterPro:PPC_dom	PANTHER:PTHR31500	PANTHER:PTHR31500:SF19	PFAM:PF03479	PFscan:PS51742	ProteinID:ONM11943.1
SEG:seg	SUPFAM:SSF117856	UniParc:UPI00084453C5	UniProt:A0A1D6DSQ8	MapMan:35.1	:

Description

AT-hook motif nuclear-localized protein 5

Coordinates

chr2:+:830371..832876

Molecular Weight (calculated)

44892.8 Da

IEP (calculated)

10.166

GRAVY (calculated)

-0.452

Length

435 amino acids

Sequence
(BLAST)

001: MSVAPQSASS AQLRSANAAQ GAGIGRPIGD ERQAAEQSSG PQGDCSILPC SSVPCMDAKE LISQSDLQSF YQQQQQQHRA FGGHHSPSSL AGMHSVIRPM
101: PNMNMSPTAI LNSISGGSLA GMQFQMDPPP PLLHNINATG AVTPAPAEPL KRKRGRPRKY GPDGTMRQQQ QQQAASSQQQ LVATQPRICS LSSGPDMLGS
201: SGMEDPAQKK RRGRPPGTGK KHQPSTSQGP GNAFAGSAGT SFTPHIITAS PSEDVAAKIV AFASQSSKAV CVLSAMGSVS RAVLRHPADG SPMARVHASP
301: QPYKNPAVYE GFYEILSLTG SYNLAQGGGL SVTLCSPERN VIGGVLGGPL VAAGTVQVVL GSFHQGGSRS KSKKAGKQQQ AAAFSPDSLT GGQEASPSSG
401: HNQNLTPPPS VTGGWPTSGI FDTRSSSIDI NSSRG

Best Arabidopsis Sequence Match ( AT2G45850.1 )
(BLAST)

001: MDRRDAMGLS GSGSYYIHRG LSGSGPPTFH GSPQQQQGLR HLPNQNSPFG SGSTGFGSPS LHGDPSLATA AGGAGALPHH IGVNMIAPPP PPSETPMKRK
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG

Arabidopsis Description

AHL9AT-hook motif nuclear-localized protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80834]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.