Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU89696 | Sorghum | nucleus | 79.07 | 89.24 |
| Zm00001d020951_P002 | Maize | cytosol, nucleus, peroxisome, plastid | 66.74 | 85.67 |
| Os09t0491708-01 | Rice | nucleus | 60.23 | 72.14 |
| Zm00001d052901_P002 | Maize | nucleus | 53.95 | 62.87 |
| GSMUA_Achr6P03420_001 | Banana | nucleus | 49.53 | 59.17 |
| VIT_18s0122g00700.t01 | Wine grape | nucleus | 48.14 | 58.64 |
| GSMUA_Achr3P03710_001 | Banana | nucleus | 49.53 | 58.36 |
| CDX84679 | Canola | nucleus | 35.12 | 57.63 |
| Bra022946.1-P | Field mustard | nucleus | 34.88 | 57.25 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 34.88 | 57.25 |
| Zm00001d031481_P001 | Maize | nucleus, peroxisome, plasma membrane, plastid | 54.65 | 57.04 |
| GSMUA_Achr9P12360_001 | Banana | extracellular, vacuole | 51.63 | 54.55 |
| PGSC0003DMT400075370 | Potato | nucleus | 44.19 | 53.07 |
| Solyc12g094710.1.1 | Tomato | nucleus | 43.26 | 52.1 |
| AT2G33620.2 | Thale cress | nucleus | 41.63 | 51.0 |
| HORVU5Hr1G073550.1 | Barley | nucleus, peroxisome, plastid | 46.28 | 50.77 |
| GSMUA_Achr5P23820_001 | Banana | cytosol, nucleus, plasma membrane | 48.14 | 49.17 |
| Bra021865.1-P | Field mustard | nucleus | 39.07 | 48.0 |
| Zm00001d037425_P001 | Maize | nucleus | 39.53 | 47.62 |
| KRH60876 | Soybean | nucleus | 38.37 | 46.22 |
| KRH51558 | Soybean | nucleus | 37.91 | 45.92 |
| CDY37704 | Canola | nucleus | 38.84 | 44.53 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 39.77 | 42.96 |
| Zm00001d030053_P003 | Maize | plastid | 40.47 | 41.73 |
| Zm00001d026036_P001 | Maize | nucleus | 37.67 | 40.3 |
| Zm00001d047042_P004 | Maize | cytosol, nucleus, plasma membrane | 40.0 | 40.09 |
| Zm00001d015090_P001 | Maize | extracellular | 24.42 | 39.62 |
| Zm00001d052495_P001 | Maize | cytosol, nucleus, peroxisome | 30.23 | 36.83 |
| Zm00001d004924_P001 | Maize | cytosol | 29.77 | 35.75 |
| Zm00001d018515_P002 | Maize | nucleus | 32.09 | 35.57 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 31.16 | 34.27 |
| Zm00001d051861_P001 | Maize | endoplasmic reticulum, nucleus, plastid | 31.16 | 33.5 |
| Solyc12g019430.1.1 | Tomato | cytosol, plastid, vacuole | 14.65 | 32.81 |
| PGSC0003DMT400075372 | Potato | cytosol, nucleus, peroxisome | 23.72 | 31.29 |
| Zm00001d026652_P001 | Maize | plastid | 25.12 | 27.2 |
| Zm00001d001784_P002 | Maize | nucleus | 25.81 | 25.52 |
| Zm00001d020950_P001 | Maize | cytosol | 0.47 | 1.71 |
Protein Annotations
| EnsemblPlants:Zm00001d006034_P003 | EnsemblPlants:Zm00001d006034_T003 | EnsemblPlantsGene:Zm00001d006034 | EntrezGene:100283408 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:AT_hook_DNA-bd_motif | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF0 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:ONM22620.1 | SEG:seg | SMART:SM00384 |
| SUPFAM:SSF117856 | UniParc:UPI000844BAC8 | UniProt:A0A1D6ESB0 | MapMan:35.1 | : | : |
Description
DNA binding protein
Coordinates
chr2:-:195820134..195824384
Molecular Weight (calculated)
43281.0 Da
IEP (calculated)
10.185
GRAVY (calculated)
-0.297
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEVSPSPEQ GVMAGREPFG LPKTPATPPS SGGTQGLRMA YTTDGTAIFT PVSSVPPATA TYQPVGGSAA SASSLAGVGG NGGAPVHSGG AGEPGTKKKR
101: GRPRKYGPDG SMSLALVPAS MAGEPAPAAL GASGPFSPNG PKAPNTAPSA SPDGAKKRGR PKGSTNKKHV AALGPAGAGF TPHLIFVKAG EDVSAKIMSF
201: SQHGTRAVCI LSANGAISNV TLRQSATSGG TVTYEVRILN ATSYEYRVHF DTDSQLEYFT ARYTGTAIQK SDLTDVYCLY RESSLSLGRF EILSLSGSFL
301: LSENGGQRSR TGGLSVSLAG PDGRVLGGCV AGLLTAASPV QIVVGSFDAG GKKQPKQQQQ QQLAPSPAPL NLAPTGVAAG PSSPPSRGTL SLSESSSGAP
401: PSPPHAGASG GHGQQQQQPQ PGGFSGLFWK
101: GRPRKYGPDG SMSLALVPAS MAGEPAPAAL GASGPFSPNG PKAPNTAPSA SPDGAKKRGR PKGSTNKKHV AALGPAGAGF TPHLIFVKAG EDVSAKIMSF
201: SQHGTRAVCI LSANGAISNV TLRQSATSGG TVTYEVRILN ATSYEYRVHF DTDSQLEYFT ARYTGTAIQK SDLTDVYCLY RESSLSLGRF EILSLSGSFL
301: LSENGGQRSR TGGLSVSLAG PDGRVLGGCV AGLLTAASPV QIVVGSFDAG GKKQPKQQQQ QQLAPSPAPL NLAPTGVAAG PSSPPSRGTL SLSESSSGAP
401: PSPPHAGASG GHGQQQQQPQ PGGFSGLFWK
001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
Arabidopsis Description
AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.