Factsheet for Zm00001d020951_P002

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006034_P003	Maize	nucleus	85.67	66.74
Zm00001d052901_P002	Maize	nucleus	58.81	53.39
Zm00001d031481_P001	Maize	nucleus, peroxisome, plasma membrane, plastid	60.3	49.03
TraesCS5D01G274900.1	Wheat	plastid	41.49	47.44
TraesCS5B01G266600.1	Wheat	endoplasmic reticulum, mitochondrion, nucleus, peroxisome	53.73	45.57
TraesCS5A01G267000.1	Wheat	nucleus, peroxisome, vacuole	53.73	45.34
Zm00001d037425_P001	Maize	nucleus	45.97	43.14
PGSC0003DMT400059682	Potato	nucleus	40.0	41.1
Solyc02g038760.2.1	Tomato	nucleus	40.0	41.1
PGSC0003DMT400035486	Potato	nucleus, plastid	28.66	36.78
Zm00001d030053_P003	Maize	plastid	44.78	35.97
Zm00001d026036_P001	Maize	nucleus	42.39	35.32
Zm00001d015090_P001	Maize	extracellular	27.76	35.09
Zm00001d047042_P004	Maize	cytosol, nucleus, plasma membrane	44.48	34.73
Solyc02g082300.2.1	Tomato	nucleus, plastid	25.67	32.95
Zm00001d052495_P001	Maize	cytosol, nucleus, peroxisome	34.03	32.29
Zm00001d004924_P001	Maize	cytosol	34.03	31.84
Zm00001d018515_P002	Maize	nucleus	35.82	30.93
Zm00001d049661_P001	Maize	cytosol, peroxisome, plasma membrane	35.22	30.18
Zm00001d051861_P001	Maize	endoplasmic reticulum, nucleus, plastid	35.22	29.5
Zm00001d026652_P001	Maize	plastid	29.85	25.19
Zm00001d001784_P002	Maize	nucleus	30.45	23.45
TraesCS5D01G274800.1	Wheat	cytosol	0.6	1.71
Zm00001d020950_P001	Maize	cytosol	0.6	1.71
TraesCS5A01G266900.1	Wheat	cytosol	0.6	1.71
TraesCS5B01G266500.1	Wheat	cytosol	0.6	1.71

Protein Annotations

EnsemblPlants:Zm00001d020951_P002	EnsemblPlants:Zm00001d020951_T002	EnsemblPlantsGene:Zm00001d020951	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31500	PANTHER:PTHR31500:SF0	PFAM:PF03479	PFscan:PS51742	ProteinID:ONM55928.1	SEG:seg
SUPFAM:SSF117856	UniParc:UPI000844C416	UniProt:A0A1D6I788	MapMan:35.1	:	:

Description

AT-hook motif nuclear-localized protein 10

Coordinates

chr7:-:137493946..137514552

Molecular Weight (calculated)

33093.3 Da

IEP (calculated)

10.220

GRAVY (calculated)

-0.146

Length

335 amino acids

Sequence
(BLAST)

001: MMKVSPSPEQ EVMAGREPFG LPKTPATPPS AGSTQSLRMA YTTDGTAIFT PVISVSVLPA TATYQPVGGS AVTASSLAGV GGNGGAGEPV PKKKRGRPRK
101: YGPDGSMSLA LVPASMATAP APPGVSGPAG TGFTPHVIFV KAGEDVSAKI MSFPQNGTRA VCVLSANGIV SNVTLRQSAT SGGTVTHEGR FEILSLSGSF
201: LLSEDGGHRS RTGGLSVSLA GPDGRVLGGS VAGLLTAASP VQIVVGTFDA DGEKKPKQQQ QQLAPSPPDP SPAPLKLAPT GVAAGPSSPP SRGTLSLSES
301: SGGAPSPPHA GASGGGGGGY GQQQQPVGFP GLSWK

Best Arabidopsis Sequence Match ( AT2G33620.1 )
(BLAST)

001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K

Arabidopsis Description

AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.