Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG25625 | Sorghum | nucleus | 85.91 | 84.99 |
| TraesCS7D01G247300.2 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 72.9 | 72.7 |
| Os08t0512400-02 | Rice | nucleus | 69.65 | 72.6 |
| TraesCS7A01G248500.1 | Wheat | nucleus | 72.63 | 72.43 |
| Zm00001d031481_P001 | Maize | nucleus, peroxisome, plasma membrane, plastid | 80.49 | 72.09 |
| HORVU7Hr1G051150.4 | Barley | nucleus | 71.54 | 71.93 |
| TraesCS7B01G143000.1 | Wheat | nucleus | 69.92 | 71.47 |
| Zm00001d020951_P002 | Maize | cytosol, nucleus, peroxisome, plastid | 53.39 | 58.81 |
| GSMUA_Achr6P03420_001 | Banana | nucleus | 56.91 | 58.33 |
| Bra022946.1-P | Field mustard | nucleus | 40.11 | 56.49 |
| GSMUA_Achr3P03710_001 | Banana | nucleus | 55.83 | 56.44 |
| CDX84679 | Canola | nucleus | 39.84 | 56.11 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 39.57 | 55.73 |
| VIT_18s0122g00700.t01 | Wine grape | nucleus | 52.03 | 54.39 |
| Zm00001d006034_P003 | Maize | nucleus | 62.87 | 53.95 |
| GSMUA_Achr9P12360_001 | Banana | extracellular, vacuole | 56.91 | 51.6 |
| PGSC0003DMT400075370 | Potato | nucleus | 49.05 | 50.56 |
| Solyc12g094710.1.1 | Tomato | nucleus | 47.43 | 49.02 |
| AT2G33620.2 | Thale cress | nucleus | 46.61 | 49.0 |
| Bra021865.1-P | Field mustard | nucleus | 44.99 | 47.43 |
| KRH60876 | Soybean | nucleus | 44.17 | 45.66 |
| KRH51558 | Soybean | nucleus | 43.9 | 45.63 |
| GSMUA_Achr5P23820_001 | Banana | cytosol, nucleus, plasma membrane | 51.76 | 45.37 |
| CDY37704 | Canola | nucleus | 44.99 | 44.27 |
| Zm00001d037425_P001 | Maize | nucleus | 42.01 | 43.42 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 45.26 | 41.96 |
| Zm00001d026036_P001 | Maize | nucleus | 44.44 | 40.8 |
| Zm00001d030053_P003 | Maize | plastid | 44.44 | 39.33 |
| Zm00001d047042_P004 | Maize | cytosol, nucleus, plasma membrane | 43.63 | 37.53 |
| Zm00001d015090_P001 | Maize | extracellular | 25.47 | 35.47 |
| Zm00001d052495_P001 | Maize | cytosol, nucleus, peroxisome | 33.6 | 35.13 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 35.5 | 33.5 |
| Zm00001d004924_P001 | Maize | cytosol | 32.25 | 33.24 |
| Zm00001d018515_P002 | Maize | nucleus | 33.88 | 32.22 |
| Solyc12g019430.1.1 | Tomato | cytosol, plastid, vacuole | 16.26 | 31.25 |
| Zm00001d051861_P001 | Maize | endoplasmic reticulum, nucleus, plastid | 33.33 | 30.75 |
| PGSC0003DMT400075372 | Potato | cytosol, nucleus, peroxisome | 26.02 | 29.45 |
| Zm00001d026652_P001 | Maize | plastid | 30.35 | 28.21 |
| Zm00001d001784_P002 | Maize | nucleus | 30.89 | 26.21 |
| Zm00001d020950_P001 | Maize | cytosol | 0.27 | 0.85 |
Protein Annotations
| EntrezGene:100284796 | Gene3D:3.30.1330.80 | MapMan:35.1 | ProteinID:AQK58316.1 | ProteinID:AQK58318.1 | ProteinID:AQK58319.1 |
| InterPro:AT_hook_DNA-bd_motif | UniProt:B4FRQ6 | EMBL:BT039794 | EMBL:BT055165 | EMBL:BT060574 | EMBL:BT063307 |
| EMBL:BT063927 | EMBL:BT066414 | EMBL:BT086054 | EMBL:EU970766 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:IPR005175 | PFAM:PF03479 | InterPro:PPC_dom | PFscan:PS51742 |
| PANTHER:PTHR31500 | PANTHER:PTHR31500:SF13 | SMART:SM00384 | SUPFAM:SSF117856 | UniParc:UPI00017B77B2 | EnsemblPlantsGene:Zm00001d052901 |
| EnsemblPlants:Zm00001d052901_P002 | EnsemblPlants:Zm00001d052901_T002 | SEG:seg | : | : | : |
Description
AT-hook motif nuclear-localized protein 10
Coordinates
chr4:-:204071169..204075032
Molecular Weight (calculated)
36664.2 Da
IEP (calculated)
10.836
GRAVY (calculated)
-0.218
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVRSEQGLM AGRDLFGLTK SPPAPAPPSS AAMQSVRMAY TADGTAVFAP VSSSPATPSY QPQGAAHGAS MSAATVVGGN GAPAAPSMGE PLAKKKRGRP
101: RKYGPDGSMA LAMVPASAAS GSPATGQGFS GPFSPPALNP ASSLVVASPD GFKKRGRPKG STNKPRVDAA GSSGAGFTPH VITVQAGEDV ASKIMSFSQH
201: GTHGVCVLSA NGSISNVTLR QTATSGRTVT YEGQFEILSL SGSFFLAEDG VQRSRNGSLS VSLAGPDGRL LGGGVAGLLV AASPVQIVLG SFNSGGGKEP
301: QKQAPSEPTS APPRVAPTAG MGGPSSPSSR GTLSESSGGA GSPPPLHRAM AASASNSNQP PFLSSMPWR
101: RKYGPDGSMA LAMVPASAAS GSPATGQGFS GPFSPPALNP ASSLVVASPD GFKKRGRPKG STNKPRVDAA GSSGAGFTPH VITVQAGEDV ASKIMSFSQH
201: GTHGVCVLSA NGSISNVTLR QTATSGRTVT YEGQFEILSL SGSFFLAEDG VQRSRNGSLS VSLAGPDGRL LGGGVAGLLV AASPVQIVLG SFNSGGGKEP
301: QKQAPSEPTS APPRVAPTAG MGGPSSPSSR GTLSESSGGA GSPPPLHRAM AASASNSNQP PFLSSMPWR
001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K
Arabidopsis Description
AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.