Factsheet for HORVU7Hr1G051150.4

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G247300.2	Wheat	mitochondrion, nucleus, peroxisome, plastid	97.0	96.22
TraesCS7B01G143000.1	Wheat	nucleus	94.28	95.84
TraesCS7A01G248500.1	Wheat	nucleus	96.46	95.68
KXG25625	Sorghum	nucleus	76.57	75.34
Os08t0512400-02	Rice	nucleus	71.93	74.58
Zm00001d052901_P002	Maize	nucleus	71.93	71.54
Zm00001d031481_P001	Maize	nucleus, peroxisome, plasma membrane, plastid	71.39	63.59
Bra022946.1-P	Field mustard	nucleus	41.42	58.02
CDX79537	Canola	mitochondrion, nucleus, plastid	41.14	57.63
CDX84679	Canola	nucleus	41.14	57.63
GSMUA_Achr6P03420_001	Banana	nucleus	53.95	55.0
GSMUA_Achr3P03710_001	Banana	nucleus	53.68	53.97
VIT_18s0122g00700.t01	Wine grape	nucleus	51.77	53.82
PGSC0003DMT400075370	Potato	nucleus	49.32	50.56
HORVU5Hr1G073550.1	Barley	nucleus, peroxisome, plastid	53.95	50.51
GSMUA_Achr9P12360_001	Banana	extracellular, vacuole	55.86	50.37
AT2G33620.2	Thale cress	nucleus	47.96	50.14
Solyc12g094710.1.1	Tomato	nucleus	47.96	49.3
Bra021865.1-P	Field mustard	nucleus	46.59	48.86
GSMUA_Achr5P23820_001	Banana	cytosol, nucleus, plasma membrane	52.86	46.08
CDY37704	Canola	nucleus	46.87	45.87
KRH51558	Soybean	nucleus	43.32	44.79
KRH60876	Soybean	nucleus	42.78	43.98
HORVU2Hr1G105800.13	Barley	cytosol, vacuole	36.78	43.97
HORVU7Hr1G065300.2	Barley	mitochondrion, plastid	22.34	43.39
CDY23720	Canola	extracellular, plasma membrane, vacuole	46.87	43.22
HORVU0Hr1G015180.2	Barley	cytosol, extracellular	24.25	37.71
HORVU2Hr1G123730.3	Barley	plastid	19.35	33.81
HORVU1Hr1G049980.12	Barley	nucleus	41.69	32.97
HORVU7Hr1G075040.1	Barley	plastid	34.33	32.06
HORVU5Hr1G041290.4	Barley	cytosol, nucleus, peroxisome	31.06	30.56
Solyc12g019430.1.1	Tomato	cytosol, plastid, vacuole	15.53	29.69
HORVU7Hr1G027950.1	Barley	extracellular, mitochondrion, plasma membrane	18.8	29.11
PGSC0003DMT400075372	Potato	cytosol, nucleus, peroxisome	24.52	27.61
HORVU7Hr1G028110.15	Barley	plasma membrane	27.25	26.95
HORVU7Hr1G122340.3	Barley	nucleus	22.34	23.5

Protein Annotations

EMBL:AK365376	EnsemblPlants:HORVU7Hr1G051150.4	EnsemblPlantsGene:HORVU7Hr1G051150	Gene3D:3.30.1330.80	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:AT_hook_DNA-bd_motif	InterPro:IPR005175	InterPro:PPC_dom	PANTHER:PTHR31500
PANTHER:PTHR31500:SF13	PFAM:PF03479	PFscan:PS51742	SEG:seg	SMART:SM00384	SUPFAM:SSF117856
UniParc:UPI0002006A2F	UniProt:F2DNA8	MapMan:35.1	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DNA8]

Coordinates

chrchr7H:-:190712096..190716193

Molecular Weight (calculated)

36473.3 Da

IEP (calculated)

11.263

GRAVY (calculated)

-0.220

Length

367 amino acids

Sequence
(BLAST)

001: MEVRSEQGLM AGRDLFGLPK SQPAPAPAAP QSSAAMQSVR MAYTADGTPV FAPVSSAVAP PGFQTAGAPA HGSTMSAARA AGGNGVAAPP GMGEPSAKKK
101: RGRPRKYGPD AAMSLALVTV PTAAGSAAVT QGASGRPFSP TLPGNFVPSA SPDGGKKRGR PKGSTNKPRV DGGGPAGVGF TPHVLTVQAG EDVSSKIMSF
201: SQNGTRAVCV LSANGSISNV TLRQTGTSGG TVTYEGRFEI LSLSGSIFVT DNGGQRTRTG GLSVSLAGPD GRLLGGGVAG LLIAASPIQI VVGSFNAGGK
301: KEPKPQAPSE PVPLKVVPST GIGMAANSPP SRGTLSESSG GTASPRHQGF ASTNNNQPPI LSSMPWK

Best Arabidopsis Sequence Match ( AT2G33620.3 )
(BLAST)

001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K

Arabidopsis Description

AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.