Factsheet for HORVU5Hr1G041290.4

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G130400.1	Wheat	plastid	92.76	94.02
TraesCS5A01G130500.1	Wheat	plastid	92.49	93.5
TraesCS5D01G138000.1	Wheat	plastid	91.96	93.46
TraesCS5B01G129200.1	Wheat	plastid	91.15	92.64
Os11t0149100-01	Rice	cytosol, nucleus, peroxisome	77.48	78.96
EES15662	Sorghum	cytosol, nucleus, peroxisome	72.12	75.56
Zm00001d052495_P001	Maize	cytosol, nucleus, peroxisome	70.24	74.22
EES07975	Sorghum	cytosol	70.78	72.93
Zm00001d004924_P001	Maize	cytosol	68.1	70.95
Os12t0147000-00	Rice	nucleus	72.12	70.6
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	37.0	41.07
GSMUA_Achr2P20250_001	Banana	cytosol, peroxisome, plastid	37.8	38.42
VIT_08s0007g04020.t01	Wine grape	nucleus	36.46	37.67
GSMUA_Achr6P13410_001	Banana	cytosol, nucleus, peroxisome	36.46	37.16
HORVU2Hr1G105800.13	Barley	cytosol, vacuole	30.56	37.13
HORVU0Hr1G015180.2	Barley	cytosol, extracellular	23.06	36.44
HORVU7Hr1G065300.2	Barley	mitochondrion, plastid	18.23	35.98
HORVU2Hr1G123730.3	Barley	plastid	20.11	35.71
KRH20019	Soybean	nucleus	33.24	32.72
HORVU7Hr1G051150.4	Barley	nucleus	30.56	31.06
KRH32644	Soybean	plastid	32.44	30.56
KRH25156	Soybean	cytosol	20.64	29.62
PGSC0003DMT400007056	Potato	nucleus	32.17	29.56
HORVU7Hr1G075040.1	Barley	plastid	31.1	29.52
HORVU5Hr1G073550.1	Barley	nucleus, peroxisome, plastid	30.56	29.08
Solyc09g008940.2.1	Tomato	nucleus	32.17	28.78
GSMUA_Achr3P03040_001	Banana	nucleus, peroxisome, plasma membrane	35.92	27.69
HORVU7Hr1G027950.1	Barley	extracellular, mitochondrion, plasma membrane	16.09	25.32
HORVU1Hr1G049980.12	Barley	nucleus	31.1	25.0
KRH30520	Soybean	nucleus	24.66	24.86
HORVU7Hr1G122340.3	Barley	nucleus	20.91	22.35
HORVU7Hr1G028110.15	Barley	plasma membrane	18.77	18.87

Protein Annotations

EnsemblPlants:HORVU5Hr1G041290.4	EnsemblPlantsGene:HORVU5Hr1G041290	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom	PANTHER:PTHR31500
PANTHER:PTHR31500:SF24	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856	UniParc:UPI00029539B1
UniProt:M0XFZ7	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:312587667..312591423

Molecular Weight (calculated)

38380.7 Da

IEP (calculated)

9.836

GRAVY (calculated)

-0.257

Length

373 amino acids

Sequence
(BLAST)

001: MLQDMKGRVG IAVAGGHEAG RGLFRPDVSM AEREPQEAAK VEYRSSPSSP STSPTPSPPQ AAAGQGGGYA AATPHAWSLG GEQKKPSEAS AGDNGNVMQI
101: AGDGEQMAGL SSGRRRGRPR GSGRRQILAT LGEWYALSAG GSFTPHVIIV PAREDVAARI MSFSQRGPRS VCILAASGTI SNVAFNKPGS SGSSDSTFTY
201: EGLFEILQLT GSFTMAEEGG RKRTGGLSVS LAGPDGRVIG GVVAGVLRAA TPIQVIVGSF LPNSLKQHQR RMGLQPPPSA VPALPLPEAD APPPVLTAAM
301: PISQAAPGNG RHGPPVPMAP LQVHANVEHT ATTGPMNLNS SSTGFTMVGW PVSAQPMGHR PSPDINLCLT PQE

Best Arabidopsis Sequence Match ( AT4G12080.1 )
(BLAST)

001: MVLNMESTGE AVRSTTGNDG GITVVRSDAP SDFHVAQRSE SSNQSPTSVT PPPPQPSSHH TAPPPLQIST VTTTTTTAAM EGISGGLMKK KRGRPRKYGP
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT

Arabidopsis Description

AHL1ATAHL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V7H8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.