Factsheet for HORVU7Hr1G075040.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	endoplasmic reticulum
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G015180.2
HORVU7Hr1G075040.1	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25320.1	HORVU0Hr1G015180.2	AT4G12080.1	21798944
AT4G25320.1	HORVU7Hr1G075040.1	AT4G25320.1	23335615
AT4G25320.1	HORVU7Hr1G075040.1	AT5G51590.1	23335615
AT4G25320.1	HORVU7Hr1G075040.1	AT5G51590.1	23335615
AT5G51590.1	HORVU7Hr1G075040.1	AT5G51590.1	23335615

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G215600.1	Wheat	plastid	94.91	94.67
TraesCS7D01G312100.1	Wheat	plastid	95.17	94.21
TraesCS7A01G315100.1	Wheat	plastid	95.17	93.97
Os08t0118000-01	Rice	nucleus	71.76	75.81
KXG24283	Sorghum	plastid	73.54	73.54
Zm00001d049661_P001	Maize	cytosol, peroxisome, plasma membrane	71.5	71.87
GSMUA_Achr7P06500_001	Banana	cytosol, plasma membrane, plastid	50.89	59.52
HORVU0Hr1G015180.2	Barley	cytosol, extracellular	33.59	55.93
GSMUA_Achr1P19840_001	Banana	nucleus	53.69	55.38
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	52.67	54.19
GSMUA_Achr2P03170_001	Banana	cytosol, peroxisome, plasma membrane	49.36	49.74
VIT_16s0022g01810.t01	Wine grape	cytosol, nucleus, peroxisome	40.46	45.3
Solyc03g007150.2.1	Tomato	nucleus	36.9	44.62
KRH34345	Soybean	nucleus	37.4	44.55
KRG92455	Soybean	nucleus	36.39	43.33
KRH09229	Soybean	nucleus	37.15	42.44
PGSC0003DMT400079651	Potato	nucleus	36.64	41.62
KRH38723	Soybean	nucleus	36.39	41.57
PGSC0003DMT400071865	Potato	plastid	31.55	40.26
HORVU7Hr1G065300.2	Barley	mitochondrion, plastid	18.07	37.57
HORVU2Hr1G105800.13	Barley	cytosol, vacuole	28.75	36.81
Solyc06g035430.2.1	Tomato	nucleus	32.32	36.71
HORVU2Hr1G123730.3	Barley	plastid	18.83	35.24
HORVU7Hr1G051150.4	Barley	nucleus	32.06	34.33
CDX94457	Canola	nucleus	32.82	34.13
CDY16785	Canola	nucleus	33.59	33.67
Bra035899.1-P	Field mustard	nucleus	33.59	33.67
CDX87241	Canola	nucleus	33.33	33.5
AT5G62260.3	Thale cress	nucleus	34.35	33.42
CDX89422	Canola	nucleus	32.32	33.07
CDX86910	Canola	nucleus	33.33	32.83
CDX92693	Canola	nucleus	33.08	32.83
Bra019174.1-P	Field mustard	nucleus	33.08	32.83
Bra013886.1-P	Field mustard	nucleus	31.81	32.81
CDY49703	Canola	nucleus	33.08	32.58
CDY00271	Canola	nucleus	33.33	32.51
Bra010070.1-P	Field mustard	nucleus	33.33	32.51
AT5G51590.1	Thale cress	nucleus	34.61	32.46
AT4G25320.1	Thale cress	nucleus	33.33	32.43
HORVU7Hr1G027950.1	Barley	extracellular, mitochondrion, plasma membrane	18.83	31.22
CDY30710	Canola	nucleus	31.81	31.17
Bra029164.1-P	Field mustard	nucleus	33.59	31.13
HORVU5Hr1G041290.4	Barley	cytosol, nucleus, peroxisome	29.52	31.1
CDY38874	Canola	nucleus	33.33	30.97
Bra029271.1-P	Field mustard	cytosol, nucleus, peroxisome	31.55	30.92
CDY32624	Canola	nucleus	33.08	30.66
HORVU5Hr1G073550.1	Barley	nucleus, peroxisome, plastid	30.53	30.61
CDY00488	Canola	nucleus	33.08	30.3
Bra028265.1-P	Field mustard	nucleus	32.82	30.07
Bra022555.1-P	Field mustard	nucleus	31.55	29.59
CDX99902	Canola	nucleus	32.82	29.39
CDY65097	Canola	nucleus	31.3	29.36
CDX91598	Canola	nucleus	31.3	29.36
HORVU1Hr1G049980.12	Barley	nucleus	32.06	27.16
HORVU7Hr1G028110.15	Barley	plasma membrane	23.41	24.8
HORVU7Hr1G122340.3	Barley	nucleus	19.08	21.49

Protein Annotations

EnsemblPlants:HORVU7Hr1G075040.1	EnsemblPlantsGene:HORVU7Hr1G075040	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom	PANTHER:PTHR31500
PANTHER:PTHR31500:SF15	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856	UniParc:UPI00029680CB
UniProt:M0V795	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:432342668..432346320

Molecular Weight (calculated)

39607.1 Da

IEP (calculated)

9.984

GRAVY (calculated)

0.004

Length

393 amino acids

Sequence
(BLAST)

001: MEAKAAEASS PIPTAAAPVA AAAVVPEATV SFQSPTSVPP PAASHAPAPS PVDMVSPSGL FVPPGMMTAM VAGAGRGFLS AGPLLKVGKK RGRPRKYGPD
101: GSLIQPLNAT PISASAPMSA AVAAGQYTPA AAVGAAMKRG RGRPLDFAAA AAKPYHHQLQ QPQQQQFGFH FSSIGDMVAC SAGGNFTPHI ITVAPGEDVT
201: MKVISFSQQG PRAICILSAN GVISNVTLRQ PDSSGGTLTY EGRFELLSLS GSFMPTENSG ARSRSGGMSV SLASPDGRVV GGGVAGLLVA ASPVQIVVGS
301: FLPSYPMEPK QKKARVVAAP TLSQAPPAVQ LSSADTHSSE QGQHSSAAPR MNIVTSSAYS ADQNWASTVV QSAPAEASRT ASSGDLNLTA SGA

Best Arabidopsis Sequence Match ( AT4G12080.1 )
(BLAST)

001: MVLNMESTGE AVRSTTGNDG GITVVRSDAP SDFHVAQRSE SSNQSPTSVT PPPPQPSSHH TAPPPLQIST VTTTTTTAAM EGISGGLMKK KRGRPRKYGP
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT

Arabidopsis Description

AHL1ATAHL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V7H8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.