Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019174.1-P | Field mustard | nucleus | 83.17 | 84.85 |
| CDY49703 | Canola | nucleus | 83.17 | 84.21 |
| CDX92693 | Canola | nucleus | 82.18 | 83.84 |
| CDX94457 | Canola | nucleus | 76.98 | 82.28 |
| Bra013886.1-P | Field mustard | nucleus | 76.73 | 81.36 |
| CDX89422 | Canola | nucleus | 77.23 | 81.25 |
| AT5G51590.1 | Thale cress | nucleus | 66.83 | 64.44 |
| VIT_16s0022g01810.t01 | Wine grape | cytosol, nucleus, peroxisome | 40.1 | 46.15 |
| KRH34345 | Soybean | nucleus | 37.62 | 46.06 |
| KRG92455 | Soybean | nucleus | 37.38 | 45.76 |
| PGSC0003DMT400071865 | Potato | plastid | 34.65 | 45.45 |
| Solyc03g007150.2.1 | Tomato | nucleus | 36.39 | 45.23 |
| KRH09229 | Soybean | nucleus | 36.63 | 43.02 |
| Solyc06g035430.2.1 | Tomato | nucleus | 36.39 | 42.49 |
| KRH38723 | Soybean | nucleus | 36.14 | 42.44 |
| AT4G00200.2 | Thale cress | nucleus | 33.17 | 42.14 |
| PGSC0003DMT400079651 | Potato | nucleus | 35.89 | 41.91 |
| AT5G62260.3 | Thale cress | nucleus | 40.59 | 40.59 |
| GSMUA_Achr7P06500_001 | Banana | cytosol, plasma membrane, plastid | 33.42 | 40.18 |
| AT4G22770.1 | Thale cress | nucleus | 32.43 | 39.22 |
| GSMUA_Achr1P19840_001 | Banana | nucleus | 36.63 | 38.85 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 35.89 | 37.96 |
| AT4G12080.1 | Thale cress | nucleus | 33.17 | 37.64 |
| Os08t0118000-01 | Rice | nucleus | 33.17 | 36.02 |
| GSMUA_Achr2P03170_001 | Banana | cytosol, peroxisome, plasma membrane | 34.16 | 35.38 |
| KXG24283 | Sorghum | plastid | 32.67 | 33.59 |
| TraesCS7B01G215600.1 | Wheat | plastid | 32.67 | 33.5 |
| HORVU7Hr1G075040.1 | Barley | plastid | 32.43 | 33.33 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 32.18 | 33.25 |
| TraesCS7A01G315100.1 | Wheat | plastid | 32.67 | 33.17 |
| TraesCS7D01G312100.1 | Wheat | plastid | 32.43 | 33.0 |
| AT2G33620.2 | Thale cress | nucleus | 27.72 | 31.91 |
| AT5G46640.1 | Thale cress | nucleus | 27.48 | 28.76 |
| AT2G45850.1 | Thale cress | nucleus | 24.75 | 28.74 |
| AT3G61310.1 | Thale cress | nucleus, plastid | 24.5 | 27.97 |
| AT5G28590.1 | Thale cress | mitochondrion | 14.6 | 27.31 |
| AT1G63470.1 | Thale cress | nucleus | 24.01 | 25.66 |
| AT4G17950.1 | Thale cress | nucleus | 26.73 | 24.6 |
| AT1G63480.1 | Thale cress | nucleus | 20.79 | 23.27 |
| AT3G04590.2 | Thale cress | nucleus | 23.51 | 23.11 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | EntrezGene:828635 | ProteinID:AEE85041.1 | ArrayExpress:AT4G25320 | EnsemblPlantsGene:AT4G25320 |
| RefSeq:AT4G25320 | TAIR:AT4G25320 | RefSeq:AT4G25320-TAIR-G | EnsemblPlants:AT4G25320.1 | TAIR:AT4G25320.1 | EMBL:AY099572 |
| Unigene:At.2582 | EMBL:BR000339 | EMBL:BT003408 | ProteinID:CAA23073.1 | ProteinID:CAB81343.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010051 | GO:GO:0010089 |
| GO:GO:0043621 | InterPro:IPR005175 | RefSeq:NP_194262.1 | PFAM:PF03479 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0003011 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | InterPro:PPC_dom |
| PFscan:PS51742 | PANTHER:PTHR31500 | PANTHER:PTHR31500:SF18 | UniProt:Q9SB31 | SUPFAM:SSF117856 | UniParc:UPI000000BFFE |
| SEG:seg | : | : | : | : | : |
Description
AHL3AT-hook motif nuclear-localized protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB31]
Coordinates
chr4:+:12954077..12956588
Molecular Weight (calculated)
43016.3 Da
IEP (calculated)
5.044
GRAVY (calculated)
-0.473
Length
404 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEREGTNIN NNITSSFGLK QQHEAAASDG GYSMDPPPRP ENPNPFLVPP TTVPAAATVA AAVTENAATP FSLTMPTENT SAEQLKKKRG RPRKYNPDGT
101: LVVTLSPMPI SSSVPLTSEF PPRKRGRGRG KSNRWLKKSQ MFQFDRSPVD TNLAGVGTAD FVGANFTPHV LIVNAGEDVT MKIMTFSQQG SRAICILSAN
201: GPISNVTLRQ SMTSGGTLTY EGRFEILSLT GSFMQNDSGG TRSRAGGMSV CLAGPDGRVF GGGLAGLFLA AGPVQVMVGT FIAGQEQSQL ELAKERRLRF
301: GAQPSSISFN ISAEERKARF ERLNKSVAIP APTTSYTHVN TTNAVHSYYT NSVNHVKDPF SSIPVGGGGG GEVGEEEGEE DDDELEGEDE EFGGDSQSDN
401: EIPS
101: LVVTLSPMPI SSSVPLTSEF PPRKRGRGRG KSNRWLKKSQ MFQFDRSPVD TNLAGVGTAD FVGANFTPHV LIVNAGEDVT MKIMTFSQQG SRAICILSAN
201: GPISNVTLRQ SMTSGGTLTY EGRFEILSLT GSFMQNDSGG TRSRAGGMSV CLAGPDGRVF GGGLAGLFLA AGPVQVMVGT FIAGQEQSQL ELAKERRLRF
301: GAQPSSISFN ISAEERKARF ERLNKSVAIP APTTSYTHVN TTNAVHSYYT NSVNHVKDPF SSIPVGGGGG GEVGEEEGEE DDDELEGEDE EFGGDSQSDN
401: EIPS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.