Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04392 | Canola | nucleus | 61.8 | 82.09 |
| CDY47428 | Canola | nucleus | 67.98 | 78.32 |
| Bra033121.1-P | Field mustard | nucleus | 65.17 | 74.84 |
| AT4G22770.1 | Thale cress | nucleus | 63.76 | 67.96 |
| VIT_02s0025g05130.t01 | Wine grape | cytosol, nucleus, peroxisome | 59.83 | 64.55 |
| KRH57315 | Soybean | nucleus | 58.71 | 63.91 |
| KRH04046 | Soybean | nucleus | 58.71 | 63.14 |
| Solyc08g007530.2.1 | Tomato | nucleus | 55.9 | 60.67 |
| PGSC0003DMT400032575 | Potato | plastid | 55.06 | 60.49 |
| PGSC0003DMT400010017 | Potato | plastid | 53.65 | 59.87 |
| Solyc08g079630.2.1 | Tomato | nucleus | 53.65 | 59.5 |
| HORVU0Hr1G015180.2 | Barley | cytosol, extracellular | 32.87 | 49.58 |
| AT4G00200.2 | Thale cress | nucleus | 42.13 | 47.17 |
| Zm00001d015090_P001 | Maize | extracellular | 33.99 | 45.66 |
| KXG29351 | Sorghum | plastid | 41.57 | 39.47 |
| TraesCS6B01G114000.1 | Wheat | cytosol, nucleus, peroxisome | 40.73 | 37.08 |
| TraesCS6A01G083100.1 | Wheat | cytosol, nucleus, peroxisome | 41.01 | 36.87 |
| TraesCS6D01G076900.1 | Wheat | nucleus | 40.45 | 36.36 |
| Os02t0125200-00 | Rice | mitochondrion | 36.8 | 35.69 |
| AT2G33620.2 | Thale cress | nucleus | 33.15 | 33.62 |
| AT2G45850.1 | Thale cress | nucleus | 32.58 | 33.33 |
| AT4G25320.1 | Thale cress | nucleus | 37.64 | 33.17 |
| AT5G51590.1 | Thale cress | nucleus | 37.92 | 32.22 |
| AT3G61310.1 | Thale cress | nucleus, plastid | 31.18 | 31.36 |
| AT5G62260.3 | Thale cress | nucleus | 35.39 | 31.19 |
| AT1G63470.1 | Thale cress | nucleus | 31.46 | 29.63 |
| AT1G63480.1 | Thale cress | nucleus | 28.65 | 28.25 |
| AT5G28590.1 | Thale cress | mitochondrion | 16.57 | 27.31 |
| AT5G46640.1 | Thale cress | nucleus | 28.93 | 26.68 |
| AT4G17950.1 | Thale cress | nucleus | 31.46 | 25.51 |
| AT3G04590.2 | Thale cress | nucleus | 25.84 | 22.38 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | EntrezGene:826816 | UniProt:A0A178V7H8 | EMBL:AB284367 | ProteinID:AEE83094.1 |
| Symbol:AHL1 | ArrayExpress:AT4G12080 | EnsemblPlantsGene:AT4G12080 | RefSeq:AT4G12080 | TAIR:AT4G12080 | RefSeq:AT4G12080-TAIR-G |
| EnsemblPlants:AT4G12080.1 | TAIR:AT4G12080.1 | EMBL:AY070738 | EMBL:AY149932 | ProteinID:CAB40949.1 | ProteinID:CAB78251.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005694 | GO:GO:0005730 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0098687 | InterPro:IPR005175 |
| RefSeq:NP_192945.2 | ProteinID:OAP00963.1 | PFAM:PF03479 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020100 | InterPro:PPC_dom | PFscan:PS51742 |
| PANTHER:PTHR31500 | PANTHER:PTHR31500:SF7 | UniProt:Q8VYJ2 | SUPFAM:SSF117856 | UniParc:UPI00000AC4C6 | SEG:seg |
Description
AHL1ATAHL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V7H8]
Coordinates
chr4:+:7239200..7241675
Molecular Weight (calculated)
37313.8 Da
IEP (calculated)
9.945
GRAVY (calculated)
-0.391
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLNMESTGE AVRSTTGNDG GITVVRSDAP SDFHVAQRSE SSNQSPTSVT PPPPQPSSHH TAPPPLQIST VTTTTTTAAM EGISGGLMKK KRGRPRKYGP
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.