Factsheet for AT4G00200.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07238	Canola	nucleus	75.47	75.95
Bra037321.1-P	Field mustard	nucleus	75.47	75.95
CDY07239	Canola	plasma membrane	52.52	72.29
KRH00569	Soybean	cytosol, peroxisome, plastid	56.6	53.25
KRH40594	Soybean	nucleus	54.4	51.34
KRH65263	Soybean	cytosol, nucleus, plastid	55.03	50.58
KRH76268	Soybean	cytosol, nucleus, plastid	54.72	50.29
VIT_15s0048g00870.t01	Wine grape	nucleus	50.63	48.2
Solyc01g091370.2.1	Tomato	nucleus	47.17	47.17
PGSC0003DMT400033227	Potato	cytosol, nucleus, peroxisome	48.43	46.39
HORVU0Hr1G015180.2	Barley	cytosol, extracellular	33.02	44.49
AT4G22770.1	Thale cress	nucleus	46.23	44.01
Zm00001d015090_P001	Maize	extracellular	35.22	42.26
AT4G12080.1	Thale cress	nucleus	47.17	42.13
KXG29351	Sorghum	plastid	41.2	34.93
TraesCS6B01G114000.1	Wheat	cytosol, nucleus, peroxisome	41.82	34.02
TraesCS6D01G076900.1	Wheat	nucleus	42.14	33.84
TraesCS6A01G083100.1	Wheat	cytosol, nucleus, peroxisome	42.14	33.84
AT4G25320.1	Thale cress	nucleus	42.14	33.17
Os02t0125200-00	Rice	mitochondrion	38.05	32.97
AT5G62260.3	Thale cress	nucleus	39.94	31.44
AT5G51590.1	Thale cress	nucleus	41.2	31.26
AT2G33620.2	Thale cress	nucleus	33.96	30.77
AT2G45850.1	Thale cress	nucleus	33.65	30.75
AT3G61310.1	Thale cress	nucleus, plastid	33.02	29.66
AT5G46640.1	Thale cress	nucleus	35.22	29.02
AT1G63470.1	Thale cress	nucleus	32.7	27.51
AT4G17950.1	Thale cress	nucleus	36.16	26.2
AT1G63480.1	Thale cress	nucleus	29.56	26.04
AT5G28590.1	Thale cress	mitochondrion	17.61	25.93
AT3G04590.2	Thale cress	nucleus	27.04	20.92

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	EntrezGene:828162	ProteinID:AAC19314.1	ProteinID:AEE81837.1	EMBL:AK228631
ProteinID:ANM67819.1	ArrayExpress:AT4G00200	EnsemblPlantsGene:AT4G00200	RefSeq:AT4G00200	TAIR:AT4G00200	RefSeq:AT4G00200-TAIR-G
EnsemblPlants:AT4G00200.2	EMBL:BR000343	EMBL:BT023416	ProteinID:CAB80778.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR005175	RefSeq:NP_001329621.1	RefSeq:NP_191931.2	PFAM:PF03479	InterPro:PPC_dom
PFscan:PS51742	PANTHER:PTHR31500	PANTHER:PTHR31500:SF15	UniProt:Q4V3E0	SUPFAM:SSF117856	UniParc:UPI000051D531
SEG:seg	:	:	:	:	:

Description

AHL7AT-hook motif nuclear-localized protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3E0]

Coordinates

chr4:-:82364..84709

Molecular Weight (calculated)

33153.4 Da

IEP (calculated)

10.013

GRAVY (calculated)

-0.375

Length

318 amino acids

Sequence
(BLAST)

001: METSDRISPG GGIGAEVPSA YHMAPRPSDS PANQFMGLSL PPMEAPMPSS GEASGKKRRG RPRKYEANGA PLPSSSVPLV KKRVRGKLNG FDMKKMHKTI
101: GFHSSGERFG VGGGVGGGVG SNFTPHVITV NTGEDITMRI ISFSQQGPRA ICILSANGVI SNVTLRQPDS CGGTLTYEGR FEILSLSGSF METENQGSKG
201: RSGGMSVSLA GPDGRVVGGG VAGLLIAATP IQVVVGSFIT SDQQDHQKPR KQRVEHAPAA VMSVPPPPSP PPPAASVFSP TNPDREQPPS SFGISSWTNG
301: QDMPRNSATD INISLPVD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.