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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, cytosol

Predictor Summary:
  • plastid 1
  • cytosol 1
  • extracellular 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d015090_P001 Maize extracellular 72.03 64.15
TraesCS6B01G114000.1 Wheat cytosol, nucleus, peroxisome 94.07 56.78
TraesCS6A01G083100.1 Wheat cytosol, nucleus, peroxisome 94.07 56.06
TraesCS6D01G076900.1 Wheat nucleus 93.22 55.56
PGSC0003DMT400045285 Potato cytosol 31.78 50.68
Os02t0125200-00 Rice mitochondrion 76.27 49.05
KXG29351 Sorghum plastid 74.58 46.93
CDY07239 Canola plasma membrane 44.49 45.45
VIT_02s0025g05130.t01 Wine grape cytosol, nucleus, peroxisome 52.97 37.88
HORVU7Hr1G065300.2 Barley mitochondrion, plastid 30.08 37.57
PGSC0003DMT400010017 Potato plastid 50.0 36.99
Solyc08g079630.2.1 Tomato nucleus 50.0 36.76
KRH57315 Soybean nucleus 50.85 36.7
KRH04046 Soybean nucleus 50.85 36.25
PGSC0003DMT400032575 Potato plastid 49.58 36.11
Solyc08g007530.2.1 Tomato nucleus 49.15 35.37
KRH76268 Soybean cytosol, nucleus, plastid 51.27 34.97
KRH65263 Soybean cytosol, nucleus, plastid 51.27 34.97
Solyc01g091370.2.1 Tomato nucleus 47.03 34.91
VIT_15s0048g00870.t01 Wine grape nucleus 48.73 34.43
KRH00569 Soybean cytosol, peroxisome, plastid 48.73 34.02
KRH40594 Soybean nucleus 48.31 33.83
PGSC0003DMT400033227 Potato cytosol, nucleus, peroxisome 47.46 33.73
HORVU7Hr1G075040.1 Barley plastid 55.93 33.59
CDY07238 Canola nucleus 44.49 33.23
Bra037321.1-P Field mustard nucleus 44.49 33.23
AT4G00200.2 Thale cress nucleus 44.49 33.02
AT4G12080.1 Thale cress nucleus 49.58 32.87
CDY47428 Canola nucleus 42.37 32.36
CDX94122 Canola cytosol, nucleus, plasma membrane 44.92 32.22
Bra033121.1-P Field mustard nucleus 41.95 31.94
Bra019359.1-P Field mustard nucleus 44.49 31.91
CDX98767 Canola nucleus 44.07 31.61
Bra013646.1-P Field mustard nucleus 39.41 30.49
HORVU2Hr1G123730.3 Barley plastid 27.12 30.48
AT4G22770.1 Thale cress nucleus 42.37 29.94
CDY04392 Canola nucleus 33.9 29.85
CDY41291 Canola nucleus 38.56 29.84
HORVU2Hr1G105800.13 Barley cytosol, vacuole 36.44 28.01
HORVU7Hr1G027950.1 Barley extracellular, mitochondrion, plasma membrane 25.0 24.89
CDX82971 Canola plastid 22.46 24.65
HORVU7Hr1G051150.4 Barley nucleus 37.71 24.25
HORVU5Hr1G041290.4 Barley cytosol, nucleus, peroxisome 36.44 23.06
HORVU5Hr1G073550.1 Barley nucleus, peroxisome, plastid 35.59 21.43
HORVU1Hr1G049980.12 Barley nucleus 38.56 19.61
HORVU7Hr1G122340.3 Barley nucleus 28.39 19.2
HORVU7Hr1G028110.15 Barley plasma membrane 24.58 15.63
Protein Annotations
EnsemblPlants:HORVU0Hr1G015180.2EnsemblPlantsGene:HORVU0Hr1G015180Gene3D:3.30.1330.80InterPro:IPR005175InterPro:PPC_domPANTHER:PTHR31500
PANTHER:PTHR31500:SF15PFAM:PF03479PFscan:PS51742SEG:segSUPFAM:SSF117856UniParc:UPI000B469737
UniProt:A0A287E224MapMan:35.1::::
Description
No Description!
Coordinates
chrchrUn:+:83380501..83384523
Molecular Weight (calculated)
23819.4 Da
IEP (calculated)
8.069
GRAVY (calculated)
0.099
Length
236 amino acids
Sequence
(BLAST)
001: APVSVAAVAA PTPQHLAPPL GDVVGCASGA NFTPHILNVA TGEDINMKVI SFSQQGPRAI CILSANGVIS NVTLRQHDSL GGTVTYEGRF ELLSLSGSFT
101: PTEKGGTRDR CGGMSVSLAA ADGRVIGGGV AGLLVAASPV QVVVGSFLPS YQMEQNGKKP VIEMKTVAAQ PTVGFTISSG GDMADSYSGS QARAGKGASA
201: FRVENWTAQP VASAPPAAEA RRTPSSEVIK VPVSGG
Best Arabidopsis Sequence Match ( AT4G12080.1 )
(BLAST)
001: MVLNMESTGE AVRSTTGNDG GITVVRSDAP SDFHVAQRSE SSNQSPTSVT PPPPQPSSHH TAPPPLQIST VTTTTTTAAM EGISGGLMKK KRGRPRKYGP
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
Arabidopsis Description
AHL1ATAHL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V7H8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.