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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G015180.2 Barley cytosol, extracellular 50.68 31.78
Zm00001d015090_P001 Maize extracellular 51.35 28.68
PGSC0003DMT400010017 Potato plastid 60.14 27.9
PGSC0003DMT400032575 Potato plastid 59.46 27.16
PGSC0003DMT400033227 Potato cytosol, nucleus, peroxisome 50.0 22.29
PGSC0003DMT400071865 Potato plastid 45.95 22.08
Os02t0125200-00 Rice mitochondrion 54.05 21.8
KXG29351 Sorghum plastid 53.38 21.07
PGSC0003DMT400079651 Potato nucleus 48.65 20.81
PGSC0003DMT400000467 Potato nucleus 47.3 20.65
TraesCS6B01G114000.1 Wheat cytosol, nucleus, peroxisome 53.38 20.2
TraesCS6A01G083100.1 Wheat cytosol, nucleus, peroxisome 53.38 19.95
PGSC0003DMT400045147 Potato plastid 43.92 19.7
TraesCS6D01G076900.1 Wheat nucleus 52.7 19.7
PGSC0003DMT400059682 Potato nucleus 41.89 19.02
PGSC0003DMT400075370 Potato nucleus 45.95 18.99
PGSC0003DMT400073848 Potato nucleus 40.54 18.18
PGSC0003DMT400075372 Potato cytosol, nucleus, peroxisome 39.86 18.1
PGSC0003DMT400035486 Potato nucleus, plastid 31.76 18.01
PGSC0003DMT400007056 Potato nucleus 46.62 17.0
PGSC0003DMT400052826 Potato nucleus 39.19 16.11
PGSC0003DMT400014926 Potato plastid 37.16 15.94
PGSC0003DMT400031843 Potato plastid 40.54 15.62
Protein Annotations
EnsemblPlants:PGSC0003DMT400045285EnsemblPlantsGene:PGSC0003DMG402017566Gene3D:3.30.1330.80InterPro:IPR005175InterPro:PPC_domPANTHER:PTHR31500
PANTHER:PTHR31500:SF15PFAM:PF03479PFscan:PS51742PGSC:PGSC0003DMG402017566SUPFAM:SSF117856UniParc:UPI0002961F5C
UniProt:M1BHE1MapMan:35.1::::
Description
DNA binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG402017566]
Coordinates
chr6:+:43490483..43493448
Molecular Weight (calculated)
15837.1 Da
IEP (calculated)
9.401
GRAVY (calculated)
0.059
Length
148 amino acids
Sequence
(BLAST)
001: MRTNNQVRVR TDEPSGFIGQ RVSRIIRGNV MTHIITVNTG EDVSMKVLSF FQQGSRSMCI LSATGVISSV TFHQTDTSGG KVAFEGRYDL LTFAGSFVHS
101: ETGGMRNLSG GMSVSLISPE GRVIGGRIDG QLVAASPVQI LVGFLPEN
Best Arabidopsis Sequence Match ( AT4G12080.1 )
(BLAST)
001: MVLNMESTGE AVRSTTGNDG GITVVRSDAP SDFHVAQRSE SSNQSPTSVT PPPPQPSSHH TAPPPLQIST VTTTTTTAAM EGISGGLMKK KRGRPRKYGP
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
Arabidopsis Description
AHL1ATAHL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V7H8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.