Factsheet for Bra019359.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98767	Canola	nucleus	98.78	98.78
AT4G22770.1	Thale cress	nucleus	83.89	82.63
Bra013646.1-P	Field mustard	nucleus	76.6	82.62
KRH57315	Soybean	nucleus	60.18	60.55
KRH04046	Soybean	nucleus	60.18	59.82
VIT_02s0025g05130.t01	Wine grape	cytosol, nucleus, peroxisome	59.57	59.39
Bra033121.1-P	Field mustard	nucleus	55.93	59.35
PGSC0003DMT400032575	Potato	plastid	56.23	57.1
PGSC0003DMT400010017	Potato	plastid	54.71	56.43
Solyc08g007530.2.1	Tomato	nucleus	56.23	56.4
Solyc08g079630.2.1	Tomato	nucleus	54.1	55.45
Bra037321.1-P	Field mustard	nucleus	45.9	47.78
HORVU0Hr1G015180.2	Barley	cytosol, extracellular	31.91	44.49
Zm00001d015090_P001	Maize	extracellular	34.35	42.64
Bra022946.1-P	Field mustard	nucleus	30.7	38.55
KXG29351	Sorghum	plastid	43.16	37.87
TraesCS6A01G083100.1	Wheat	cytosol, nucleus, peroxisome	42.25	35.1
Os02t0125200-00	Rice	mitochondrion	38.6	34.6
TraesCS6D01G076900.1	Wheat	nucleus	41.64	34.6
TraesCS6B01G114000.1	Wheat	cytosol, nucleus, peroxisome	41.03	34.53
Bra019174.1-P	Field mustard	nucleus	40.43	33.59
Bra013886.1-P	Field mustard	nucleus	37.69	32.55
Bra025511.1-P	Field mustard	nucleus	27.05	32.13
Bra014444.1-P	Field mustard	nucleus	31.91	31.53
Bra007595.1-P	Field mustard	nucleus	32.22	31.09
Bra039309.1-P	Field mustard	nucleus	32.22	31.09
Bra029164.1-P	Field mustard	nucleus	39.51	30.66
Bra035899.1-P	Field mustard	nucleus	35.56	29.85
Bra028265.1-P	Field mustard	nucleus	38.91	29.84
Bra021865.1-P	Field mustard	nucleus	31.31	29.43
Bra010070.1-P	Field mustard	nucleus	35.56	29.03
Bra022555.1-P	Field mustard	nucleus	36.17	28.4
Bra027642.1-P	Field mustard	nucleus	32.83	28.35
Bra027801.1-P	Field mustard	nucleus	32.22	28.27
Bra029271.1-P	Field mustard	cytosol, nucleus, peroxisome	34.04	27.93
Bra025716.1-P	Field mustard	nucleus	22.8	27.88
Bra003446.1-P	Field mustard	nucleus	26.75	25.96
Bra025717.1-P	Field mustard	nucleus	23.1	25.08
Bra025718.1-P	Field mustard	nucleus, plastid	22.8	24.67
Bra021027.1-P	Field mustard	nucleus	30.09	24.15
Bra040133.1-P	Field mustard	nucleus	27.96	24.02
Bra017536.1-P	Field mustard	nucleus	25.53	23.8
Bra020612.1-P	Field mustard	nucleus	24.62	23.01
Bra013270.1-P	Field mustard	nucleus	29.79	23.0
Bra009999.1-P	Field mustard	nucleus	25.23	22.31

Protein Annotations

EnsemblPlants:Bra019359.1	EnsemblPlants:Bra019359.1-P	EnsemblPlantsGene:Bra019359	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31500	PANTHER:PTHR31500:SF7	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856
UniParc:UPI0002540DA7	UniProt:M4DS66	MapMan:35.1	:	:	:

Description

AT4G22770 (E=1e-135) | DNA-binding family protein

Coordinates

chrA03:-:24708369..24709819

Molecular Weight (calculated)

34327.2 Da

IEP (calculated)

9.808

GRAVY (calculated)

-0.390

Length

329 amino acids

Sequence
(BLAST)

001: MESTGEVVRT SDVSDGGVMV VRSNAPSDFH MAPRSETSNP PPASVSPPQN SFAPTAPPPT TEGFSRGPMK KKRGRPRKYG HDGAPVALSP NPISSAAPTT
101: SHVIDFSASE KRGKVKPAAT PSSFIRTKYQ VENLGEWAPS SAGANFTPHI ITVNAGEDVT KKIISFSQQG SLAICVLCAN GVVSSVTLRQ PDSSGGTLTY
201: EGRFEILSLS GSFMPSDSDG TRSRTGGMTV SLASPDGRVV GGGVAGLLVA ATPIQVVVGS FLAGTNQQDQ NPRKQNHNFV SSPMPTTSNA ADHGTIRPTS
301: SSHQIGTWTP TLASDPRHKP SHDINITLT

Best Arabidopsis Sequence Match ( AT4G22770.1 )
(BLAST)

001: METTGEVVKT TTGSDGGVTV VRSNAPSDFH MAPRSETSNT PPNSVAPPPP PPPQNSFTPS AAMDGFSSGP IKKRRGRPRK YGHDGAAVTL SPNPISSAAP
101: TTSHVIDFST TSEKRGKMKP ATPTPSSFIR PKYQVENLGE WSPSSAAANF TPHIITVNAG EDVTKRIISF SQQGSLAICV LCANGVVSSV TLRQPDSSGG
201: TLTYEGRFEI LSLSGTFMPS DSDGTRSRTG GMSVSLASPD GRVVGGGVAG LLVAATPIQV VVGTFLGGTN QQEQTPKPHN HNFMSSPLMP TSSNVADHRT
301: IRPMTSSLPI STWTPSFPSD SRHKHSHDFN ITLT

Arabidopsis Description

AHL2AT-hook motif nuclear-localized protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O49658]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.