Factsheet for Bra013646.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41291	Canola	nucleus	98.03	98.03
Bra019359.1-P	Field mustard	nucleus	82.62	76.6
AT4G22770.1	Thale cress	nucleus	79.34	72.46
Bra033121.1-P	Field mustard	nucleus	57.05	56.13
KRH57315	Soybean	nucleus	57.7	53.82
KRH04046	Soybean	nucleus	57.05	52.57
VIT_02s0025g05130.t01	Wine grape	cytosol, nucleus, peroxisome	56.72	52.42
PGSC0003DMT400010017	Potato	plastid	52.46	50.16
PGSC0003DMT400032575	Potato	plastid	52.79	49.69
Solyc08g079630.2.1	Tomato	nucleus	52.13	49.53
Solyc08g007530.2.1	Tomato	nucleus	53.11	49.39
Bra037321.1-P	Field mustard	nucleus	46.56	44.94
HORVU0Hr1G015180.2	Barley	cytosol, extracellular	30.49	39.41
Zm00001d015090_P001	Maize	extracellular	33.44	38.49
Bra022946.1-P	Field mustard	nucleus	32.13	37.4
KXG29351	Sorghum	plastid	43.28	35.2
TraesCS6A01G083100.1	Wheat	cytosol, nucleus, peroxisome	41.97	32.32
TraesCS6D01G076900.1	Wheat	nucleus	41.64	32.07
TraesCS6B01G114000.1	Wheat	cytosol, nucleus, peroxisome	40.98	31.97
Os02t0125200-00	Rice	mitochondrion	37.7	31.34
Bra019174.1-P	Field mustard	nucleus	40.0	30.81
Bra013886.1-P	Field mustard	nucleus	37.7	30.18
Bra021865.1-P	Field mustard	nucleus	34.1	29.71
Bra039309.1-P	Field mustard	nucleus	32.79	29.33
Bra025511.1-P	Field mustard	nucleus	26.56	29.24
Bra035899.1-P	Field mustard	nucleus	36.39	28.32
Bra029164.1-P	Field mustard	nucleus	39.34	28.3
Bra007595.1-P	Field mustard	nucleus	31.48	28.15
Bra028265.1-P	Field mustard	nucleus	39.34	27.97
Bra014444.1-P	Field mustard	nucleus	30.49	27.93
Bra010070.1-P	Field mustard	nucleus	36.72	27.79
Bra022555.1-P	Field mustard	nucleus	36.72	26.73
Bra029271.1-P	Field mustard	cytosol, nucleus, peroxisome	34.75	26.43
Bra027642.1-P	Field mustard	nucleus	32.79	26.25
Bra027801.1-P	Field mustard	nucleus	31.8	25.87
Bra025716.1-P	Field mustard	nucleus	22.3	25.28
Bra003446.1-P	Field mustard	nucleus	26.56	23.89
Bra025717.1-P	Field mustard	nucleus	23.61	23.76
Bra021027.1-P	Field mustard	nucleus	31.15	23.17
Bra013270.1-P	Field mustard	nucleus	32.13	23.0
Bra017536.1-P	Field mustard	nucleus	25.9	22.38
Bra025718.1-P	Field mustard	nucleus, plastid	22.3	22.37
Bra040133.1-P	Field mustard	nucleus	26.56	21.15
Bra020612.1-P	Field mustard	nucleus	23.28	20.17
Bra009999.1-P	Field mustard	nucleus	23.93	19.62

Protein Annotations

EnsemblPlants:Bra013646.1	EnsemblPlants:Bra013646.1-P	EnsemblPlantsGene:Bra013646	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31500	PANTHER:PTHR31500:SF7	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856
UniParc:UPI00025458F3	UniProt:M4DAY6	MapMan:35.1	:	:	:

Description

AT4G22770 (E=1e-111) | DNA-binding family protein

Coordinates

chrA01:-:6829636..6831096

Molecular Weight (calculated)

32098.8 Da

IEP (calculated)

10.135

GRAVY (calculated)

-0.361

Length

305 amino acids

Sequence
(BLAST)

001: METTREVVKT TGGIDGGLTV VRSNAPSEFH IAPKSETSNP RPTSVAPSLQ PPQNSFASTG PPPATEGFST RQMKKKRGRP RKYGHDGAAV TLSPNPISSA
101: APTTSHVIDF SAAEKRGRVK PATERSFVRT KYQVENLGEW APSSAGANFT PHIITVNAGE DVTKRIISFS QQGSLAICVL CANGVVSSVT LRQPDSCGGT
201: LTYEGRYEIL SLSGSFMPID SDGTRSRTGG MTVSLACPDG RVVGGGVAGS LVAATPIQLV VGSFIAGTNQ QHQNPKNQNH SFTPSPIPTI RPTSSSLQMD
301: TTSRF

Best Arabidopsis Sequence Match ( AT4G22770.1 )
(BLAST)

001: METTGEVVKT TTGSDGGVTV VRSNAPSDFH MAPRSETSNT PPNSVAPPPP PPPQNSFTPS AAMDGFSSGP IKKRRGRPRK YGHDGAAVTL SPNPISSAAP
101: TTSHVIDFST TSEKRGKMKP ATPTPSSFIR PKYQVENLGE WSPSSAAANF TPHIITVNAG EDVTKRIISF SQQGSLAICV LCANGVVSSV TLRQPDSSGG
201: TLTYEGRFEI LSLSGTFMPS DSDGTRSRTG GMSVSLASPD GRVVGGGVAG LLVAATPIQV VVGTFLGGTN QQEQTPKPHN HNFMSSPLMP TSSNVADHRT
301: IRPMTSSLPI STWTPSFPSD SRHKHSHDFN ITLT

Arabidopsis Description

AHL2AT-hook motif nuclear-localized protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O49658]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.