Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013646.1-P | Field mustard | nucleus | 98.03 | 98.03 |
| CDX82971 | Canola | plastid | 61.31 | 86.98 |
| CDX98767 | Canola | nucleus | 83.28 | 77.2 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 83.28 | 77.2 |
| AT4G22770.1 | Thale cress | nucleus | 79.34 | 72.46 |
| CDY04392 | Canola | nucleus | 55.08 | 62.69 |
| CDY47428 | Canola | nucleus | 60.0 | 59.22 |
| KRH57315 | Soybean | nucleus | 57.7 | 53.82 |
| KRH04046 | Soybean | nucleus | 57.05 | 52.57 |
| VIT_02s0025g05130.t01 | Wine grape | cytosol, nucleus, peroxisome | 56.07 | 51.82 |
| PGSC0003DMT400010017 | Potato | plastid | 52.13 | 49.84 |
| PGSC0003DMT400032575 | Potato | plastid | 52.46 | 49.38 |
| Solyc08g079630.2.1 | Tomato | nucleus | 51.8 | 49.22 |
| Solyc08g007530.2.1 | Tomato | nucleus | 52.79 | 49.09 |
| CDY07239 | Canola | plasma membrane | 34.1 | 45.02 |
| CDY07238 | Canola | nucleus | 46.23 | 44.62 |
| HORVU0Hr1G015180.2 | Barley | cytosol, extracellular | 29.84 | 38.56 |
| Zm00001d015090_P001 | Maize | extracellular | 32.79 | 37.74 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 31.48 | 36.64 |
| CDX84679 | Canola | nucleus | 31.48 | 36.64 |
| KXG29351 | Sorghum | plastid | 42.62 | 34.67 |
| TraesCS6A01G083100.1 | Wheat | cytosol, nucleus, peroxisome | 41.31 | 31.82 |
| TraesCS6D01G076900.1 | Wheat | nucleus | 40.98 | 31.57 |
| TraesCS6B01G114000.1 | Wheat | cytosol, nucleus, peroxisome | 40.33 | 31.46 |
| Os02t0125200-00 | Rice | mitochondrion | 37.05 | 30.79 |
| CDX94457 | Canola | nucleus | 37.7 | 30.42 |
| CDX89422 | Canola | nucleus | 38.03 | 30.21 |
| CDY49703 | Canola | nucleus | 39.34 | 30.08 |
| CDX92693 | Canola | nucleus | 39.02 | 30.05 |
| CDY37070 | Canola | nucleus | 32.79 | 29.33 |
| CDY27354 | Canola | nucleus | 33.44 | 29.23 |
| CDX87241 | Canola | nucleus | 36.72 | 28.64 |
| CDY01503 | Canola | cytosol | 23.93 | 28.19 |
| CDY16785 | Canola | nucleus | 36.07 | 28.06 |
| CDX89109 | Canola | nucleus | 30.49 | 27.76 |
| CDY38874 | Canola | nucleus | 38.36 | 27.66 |
| CDX86910 | Canola | nucleus | 36.07 | 27.57 |
| CDY00271 | Canola | nucleus | 36.39 | 27.54 |
| CDY42495 | Canola | nucleus | 30.49 | 27.51 |
| CDY00488 | Canola | nucleus | 38.69 | 27.51 |
| CDY37704 | Canola | nucleus | 33.77 | 27.47 |
| CDY41028 | Canola | nucleus, plastid | 22.3 | 27.42 |
| CDY48928 | Canola | nucleus | 30.82 | 27.33 |
| CDY32624 | Canola | nucleus | 37.7 | 27.12 |
| CDY51561 | Canola | nucleus | 30.16 | 27.06 |
| CDX71746 | Canola | nucleus | 30.49 | 27.03 |
| CDY25500 | Canola | nucleus | 32.79 | 27.03 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 31.8 | 26.8 |
| CDY45364 | Canola | nucleus | 32.13 | 26.7 |
| CDY30710 | Canola | nucleus | 35.08 | 26.68 |
| CDX99902 | Canola | nucleus | 38.36 | 26.65 |
| CDY58791 | Canola | nucleus | 28.52 | 26.52 |
| CDX91598 | Canola | nucleus | 36.39 | 26.49 |
| CDY65097 | Canola | nucleus | 36.07 | 26.25 |
| CDY34355 | Canola | nucleus | 32.46 | 26.19 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 34.1 | 26.13 |
| CDY26693 | Canola | plastid | 21.97 | 24.81 |
| CDY41027 | Canola | cytosol | 21.31 | 24.44 |
| CDY26694 | Canola | cytosol, plastid | 20.66 | 24.05 |
| CDY01506 | Canola | nucleus | 23.61 | 23.92 |
| CDX78814 | Canola | nucleus | 31.48 | 23.59 |
| CDY26692 | Canola | nucleus | 23.28 | 23.43 |
| CDY44500 | Canola | nucleus | 31.48 | 22.86 |
| CDY03203 | Canola | nucleus | 26.56 | 22.63 |
| CDY39751 | Canola | nucleus | 28.2 | 22.51 |
| CDY46385 | Canola | nucleus | 28.2 | 22.51 |
| CDY68252 | Canola | nucleus | 21.64 | 22.22 |
| CDY35172 | Canola | nucleus | 25.57 | 22.1 |
| CDY26691 | Canola | cytosol, plastid | 22.3 | 21.86 |
| CDY08882 | Canola | nucleus | 31.15 | 21.84 |
| CDX76549 | Canola | nucleus | 31.15 | 21.59 |
| CDY21122 | Canola | nucleus | 26.56 | 20.98 |
| CDY52506 | Canola | nucleus | 23.93 | 20.92 |
| CDY30005 | Canola | nucleus | 25.9 | 20.73 |
| CDY05594 | Canola | nucleus | 23.93 | 20.51 |
| CDY52477 | Canola | nucleus | 23.61 | 19.57 |
| CDY65362 | Canola | nucleus | 23.61 | 19.35 |
| CDY13231 | Canola | nucleus | 25.25 | 18.78 |
Protein Annotations
| EnsemblPlants:CDY41291 | EnsemblPlantsGene:GSBRNA2T00072720001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF7 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDY41291 | ProteinID:CDY41291.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EF2609 | UniProt:A0A078HUB9 | MapMan:35.1 | : | : |
Description
BnaA01g12480DBnaA01g12480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUB9]
Coordinates
chrLK032494:+:264632..266091
Molecular Weight (calculated)
32154.8 Da
IEP (calculated)
9.988
GRAVY (calculated)
-0.382
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: METTREVVKT TGGIDGGLTV VRSNAPSEFH IAPKSETSNP RPTSVAPSLQ PPQNSFASTG PPPATEGFST RQMKKKRGRP RKYGHDGAAV TLSPNPISSA
101: APTTSHVIDF SAAEKRGRVK PATERSFVRT KYQVENLGEW APSSAGANFT PHIITVNAGE DVTKRIISFS QQGSLAICVL CANGVVSSVT LRQPDSCGGT
201: LTYEGRYEIL SLSGSFMPID SDGTRSRTGG MTVSLASPDG RVVGGGVAGS LVAATPIQLV LGSFIAETNQ QHQNPRNQNH NFTPSPIPTI RPTSSSLQMD
301: TTSSF
101: APTTSHVIDF SAAEKRGRVK PATERSFVRT KYQVENLGEW APSSAGANFT PHIITVNAGE DVTKRIISFS QQGSLAICVL CANGVVSSVT LRQPDSCGGT
201: LTYEGRYEIL SLSGSFMPID SDGTRSRTGG MTVSLASPDG RVVGGGVAGS LVAATPIQLV LGSFIAETNQ QHQNPRNQNH NFTPSPIPTI RPTSSSLQMD
301: TTSSF
001: METTGEVVKT TTGSDGGVTV VRSNAPSDFH MAPRSETSNT PPNSVAPPPP PPPQNSFTPS AAMDGFSSGP IKKRRGRPRK YGHDGAAVTL SPNPISSAAP
101: TTSHVIDFST TSEKRGKMKP ATPTPSSFIR PKYQVENLGE WSPSSAAANF TPHIITVNAG EDVTKRIISF SQQGSLAICV LCANGVVSSV TLRQPDSSGG
201: TLTYEGRFEI LSLSGTFMPS DSDGTRSRTG GMSVSLASPD GRVVGGGVAG LLVAATPIQV VVGTFLGGTN QQEQTPKPHN HNFMSSPLMP TSSNVADHRT
301: IRPMTSSLPI STWTPSFPSD SRHKHSHDFN ITLT
101: TTSHVIDFST TSEKRGKMKP ATPTPSSFIR PKYQVENLGE WSPSSAAANF TPHIITVNAG EDVTKRIISF SQQGSLAICV LCANGVVSSV TLRQPDSSGG
201: TLTYEGRFEI LSLSGTFMPS DSDGTRSRTG GMSVSLASPD GRVVGGGVAG LLVAATPIQV VVGTFLGGTN QQEQTPKPHN HNFMSSPLMP TSSNVADHRT
301: IRPMTSSLPI STWTPSFPSD SRHKHSHDFN ITLT
Arabidopsis Description
AHL2AT-hook motif nuclear-localized protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O49658]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.