Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029271.1-P | Field mustard | cytosol, nucleus, peroxisome | 97.26 | 97.26 |
| CDX87241 | Canola | nucleus | 78.3 | 80.31 |
| CDY16785 | Canola | nucleus | 78.3 | 80.1 |
| CDY00271 | Canola | nucleus | 79.55 | 79.16 |
| CDX86910 | Canola | nucleus | 78.3 | 78.7 |
| AT5G62260.3 | Thale cress | nucleus | 74.81 | 74.26 |
| CDX89422 | Canola | nucleus | 39.15 | 40.89 |
| CDX94457 | Canola | nucleus | 38.4 | 40.74 |
| CDY38874 | Canola | nucleus | 42.89 | 40.66 |
| KRG92455 | Soybean | nucleus | 33.42 | 40.61 |
| KRH34345 | Soybean | nucleus | 33.42 | 40.61 |
| CDY32624 | Canola | nucleus | 42.89 | 40.57 |
| Solyc03g007150.2.1 | Tomato | nucleus | 32.67 | 40.31 |
| CDX92693 | Canola | nucleus | 39.65 | 40.15 |
| VIT_16s0022g01810.t01 | Wine grape | cytosol, nucleus, peroxisome | 34.91 | 39.89 |
| CDY49703 | Canola | nucleus | 39.65 | 39.85 |
| CDY00488 | Canola | nucleus | 42.39 | 39.63 |
| CDY07239 | Canola | plasma membrane | 22.69 | 39.39 |
| KRH09229 | Soybean | nucleus | 33.67 | 39.24 |
| KRH38723 | Soybean | nucleus | 33.17 | 38.66 |
| PGSC0003DMT400071865 | Potato | plastid | 29.18 | 37.99 |
| CDY04392 | Canola | nucleus | 25.19 | 37.69 |
| CDY65097 | Canola | nucleus | 39.15 | 37.47 |
| PGSC0003DMT400079651 | Potato | nucleus | 32.17 | 37.28 |
| GSMUA_Achr7P06500_001 | Banana | cytosol, plasma membrane, plastid | 31.17 | 37.2 |
| CDX91598 | Canola | nucleus | 38.65 | 36.99 |
| CDX99902 | Canola | nucleus | 40.4 | 36.9 |
| CDY07238 | Canola | nucleus | 28.93 | 36.71 |
| CDY47428 | Canola | nucleus | 27.93 | 36.25 |
| GSMUA_Achr1P19840_001 | Banana | nucleus | 34.16 | 35.96 |
| CDX84679 | Canola | nucleus | 23.44 | 35.88 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 23.44 | 35.88 |
| Solyc06g035430.2.1 | Tomato | nucleus | 30.67 | 35.55 |
| CDY41291 | Canola | nucleus | 26.68 | 35.08 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 28.43 | 34.65 |
| CDX98767 | Canola | nucleus | 28.18 | 34.35 |
| Os08t0118000-01 | Rice | nucleus | 31.67 | 34.14 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 32.42 | 34.03 |
| CDX82971 | Canola | plastid | 17.71 | 33.02 |
| GSMUA_Achr2P03170_001 | Banana | cytosol, peroxisome, plasma membrane | 31.92 | 32.82 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 31.67 | 32.48 |
| KXG24283 | Sorghum | plastid | 31.67 | 32.32 |
| TraesCS7B01G215600.1 | Wheat | plastid | 31.42 | 31.98 |
| HORVU7Hr1G075040.1 | Barley | plastid | 31.17 | 31.81 |
| TraesCS7D01G312100.1 | Wheat | plastid | 30.67 | 30.98 |
| CDY01503 | Canola | cytosol | 19.95 | 30.89 |
| TraesCS7A01G315100.1 | Wheat | plastid | 30.42 | 30.65 |
| CDY41027 | Canola | cytosol | 19.2 | 28.95 |
| CDY26693 | Canola | plastid | 19.2 | 28.52 |
| CDY26694 | Canola | cytosol, plastid | 18.45 | 28.24 |
| CDY41028 | Canola | nucleus, plastid | 17.21 | 27.82 |
| CDY25500 | Canola | nucleus | 24.94 | 27.03 |
| CDY58791 | Canola | nucleus | 21.95 | 26.83 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 24.19 | 26.8 |
| CDY37704 | Canola | nucleus | 24.94 | 26.67 |
| CDY42495 | Canola | nucleus | 22.44 | 26.63 |
| CDX89109 | Canola | nucleus | 21.95 | 26.27 |
| CDY45364 | Canola | nucleus | 23.94 | 26.16 |
| CDY37070 | Canola | nucleus | 22.19 | 26.1 |
| CDY34355 | Canola | nucleus | 24.44 | 25.93 |
| CDY51561 | Canola | nucleus | 21.95 | 25.88 |
| CDY48928 | Canola | nucleus | 22.19 | 25.87 |
| CDY27354 | Canola | nucleus | 22.44 | 25.79 |
| CDY35172 | Canola | nucleus | 22.69 | 25.78 |
| CDX71746 | Canola | nucleus | 21.95 | 25.58 |
| CDY26692 | Canola | nucleus | 19.2 | 25.41 |
| CDY68252 | Canola | nucleus | 18.7 | 25.25 |
| CDY01506 | Canola | nucleus | 18.95 | 25.25 |
| CDY03203 | Canola | nucleus | 22.44 | 25.14 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 24.94 | 25.13 |
| CDX78814 | Canola | nucleus | 24.94 | 24.57 |
| CDY52506 | Canola | nucleus | 20.95 | 24.07 |
| CDY44500 | Canola | nucleus | 24.94 | 23.81 |
| CDY26691 | Canola | cytosol, plastid | 18.45 | 23.79 |
| CDY65362 | Canola | nucleus | 21.7 | 23.39 |
| CDY52477 | Canola | nucleus | 21.45 | 23.37 |
| CDY05594 | Canola | nucleus | 20.7 | 23.31 |
| CDY39751 | Canola | nucleus | 22.19 | 23.3 |
| CDY08882 | Canola | nucleus | 24.94 | 22.99 |
| CDX76549 | Canola | nucleus | 25.19 | 22.95 |
| CDY46385 | Canola | nucleus | 21.7 | 22.77 |
| CDY21122 | Canola | nucleus | 21.45 | 22.28 |
| CDY30005 | Canola | nucleus | 20.95 | 22.05 |
| CDY13231 | Canola | nucleus | 20.95 | 20.49 |
Protein Annotations
| EnsemblPlants:CDY30710 | EnsemblPlantsGene:GSBRNA2T00046049001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF18 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDY30710 | ProteinID:CDY30710.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EE4C74 | UniProt:A0A078GW67 | MapMan:35.1 | : | : |
Description
BnaA02g33320DBnaA02g33320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GW67]
Coordinates
chrLK032258:+:211901..213893
Molecular Weight (calculated)
42249.5 Da
IEP (calculated)
5.151
GRAVY (calculated)
-0.511
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKGGVSPS GVITVKGDEE ATEFQQNPSL LQSVGPTTVV SPSPPPPPPP PPTSVTPVSA AAAPPPLISS AGLDLTKKKR GRPRKYAPDG SLNPRYLRPT
101: LSPTPISTSI PFSGDYSHWK QGKAQQYLPV ELIKKPHMFE YGSSPAFPPP PGLSCYVGAN FTTHQFTVNA GEDVMMKAMP YSQGSQAICI LSATGSISNV
201: TLRQATTSGG TLTYEGWFEI LSLSGSFMPT EQGGTKGWSG GMSISLAGPN GKIIGGGLAG MLIAASPVQV IMGSFIVMNQ AEQTQNKKPR IMEASPPPQP
301: PPQQQQHPTF NITNVNSTSP VVATIDDPKQ QTDGGGGMMR PVAQTPFHND NSAMNNFTTT NHGYGNVNTS TNKEEADYAD GGDDDQPDDD SCDTRSLSNG
401: D
101: LSPTPISTSI PFSGDYSHWK QGKAQQYLPV ELIKKPHMFE YGSSPAFPPP PGLSCYVGAN FTTHQFTVNA GEDVMMKAMP YSQGSQAICI LSATGSISNV
201: TLRQATTSGG TLTYEGWFEI LSLSGSFMPT EQGGTKGWSG GMSISLAGPN GKIIGGGLAG MLIAASPVQV IMGSFIVMNQ AEQTQNKKPR IMEASPPPQP
301: PPQQQQHPTF NITNVNSTSP VVATIDDPKQ QTDGGGGMMR PVAQTPFHND NSAMNNFTTT NHGYGNVNTS TNKEEADYAD GGDDDQPDDD SCDTRSLSNG
401: D
001: MEEKGEISPS GVVTVKGDEA LVPRTEFQQN PSFLQFVSPT TVVTPLPPPP APSSAPVPTT VTPGSATAST GSDPTKKKRG RPRKYAPDGS LNPRFLRPTL
101: SPTPISSSIP LSGDYQWKRG KAQQQHQPLE FVKKSHKFEY GSPAPTPPLP GLSCYVGANF TTHQFTVNGG EDVTMKVMPY SQQGSRAICI LSATGSISNV
201: TLGQPTNAGG TLTYEGRFEI LSLSGSFMPT ENGGTKGRAG GMSISLAGPN GNIFGGGLAG MLIAAGPVQV VMGSFIVMHQ AEQNQKKKPR VMEAFAPPQP
301: QAPPQLQQQQ PPTFTITTVN STSPSVNTVE EQKPQAYGGG IVRPMAQMPS SFQNDNSTMN NFTPAYHGYG NMNTGTTHKE EHEDEDGGDD DDDSGDTRSQ
401: SHSG
101: SPTPISSSIP LSGDYQWKRG KAQQQHQPLE FVKKSHKFEY GSPAPTPPLP GLSCYVGANF TTHQFTVNGG EDVTMKVMPY SQQGSRAICI LSATGSISNV
201: TLGQPTNAGG TLTYEGRFEI LSLSGSFMPT ENGGTKGRAG GMSISLAGPN GNIFGGGLAG MLIAAGPVQV VMGSFIVMHQ AEQNQKKKPR VMEAFAPPQP
301: QAPPQLQQQQ PPTFTITTVN STSPSVNTVE EQKPQAYGGG IVRPMAQMPS SFQNDNSTMN NFTPAYHGYG NMNTGTTHKE EHEDEDGGDD DDDSGDTRSQ
401: SHSG
Arabidopsis Description
AHL6AT-hook motif nuclear-localized protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.