Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G25320.1 | KXG29351 | AT4G12080.1 | 21798944 |
| AT4G25320.1 | KXG24283 | AT4G25320.1 | 23335615 |
| AT4G25320.1 | KXG24283 | AT5G51590.1 | 23335615 |
| AT4G25320.1 | KXG24283 | AT5G51590.1 | 23335615 |
| AT5G51590.1 | KXG24283 | AT5G51590.1 | 23335615 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 82.7 | 83.12 |
| Os08t0118000-01 | Rice | nucleus | 76.34 | 80.65 |
| TraesCS7B01G215600.1 | Wheat | plastid | 74.55 | 74.37 |
| HORVU7Hr1G075040.1 | Barley | plastid | 73.54 | 73.54 |
| TraesCS7D01G312100.1 | Wheat | plastid | 74.05 | 73.3 |
| TraesCS7A01G315100.1 | Wheat | plastid | 74.05 | 73.12 |
| GSMUA_Achr7P06500_001 | Banana | cytosol, plasma membrane, plastid | 52.16 | 61.01 |
| GSMUA_Achr1P19840_001 | Banana | nucleus | 54.45 | 56.17 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 53.18 | 54.71 |
| KXG29351 | Sorghum | plastid | 48.09 | 50.4 |
| GSMUA_Achr2P03170_001 | Banana | cytosol, peroxisome, plasma membrane | 49.87 | 50.26 |
| KRH34345 | Soybean | nucleus | 39.95 | 47.58 |
| VIT_16s0022g01810.t01 | Wine grape | cytosol, nucleus, peroxisome | 41.48 | 46.44 |
| KRG92455 | Soybean | nucleus | 38.93 | 46.36 |
| Solyc03g007150.2.1 | Tomato | nucleus | 36.9 | 44.62 |
| KRH09229 | Soybean | nucleus | 38.93 | 44.48 |
| KRH38723 | Soybean | nucleus | 38.68 | 44.19 |
| PGSC0003DMT400071865 | Potato | plastid | 32.32 | 41.23 |
| PGSC0003DMT400079651 | Potato | nucleus | 36.13 | 41.04 |
| Solyc06g035430.2.1 | Tomato | nucleus | 33.33 | 37.86 |
| OQU89696 | Sorghum | nucleus | 36.39 | 37.53 |
| KXG25625 | Sorghum | nucleus | 34.86 | 36.73 |
| CDY16785 | Canola | nucleus | 35.11 | 35.2 |
| Bra035899.1-P | Field mustard | nucleus | 35.11 | 35.2 |
| OQU82226 | Sorghum | plastid | 31.04 | 35.16 |
| CDX87241 | Canola | nucleus | 34.86 | 35.04 |
| CDX94457 | Canola | nucleus | 33.59 | 34.92 |
| AT5G62260.3 | Thale cress | nucleus | 35.11 | 34.16 |
| CDX86910 | Canola | nucleus | 34.61 | 34.09 |
| CDX89422 | Canola | nucleus | 33.08 | 33.85 |
| CDY00271 | Canola | nucleus | 34.61 | 33.75 |
| Bra010070.1-P | Field mustard | nucleus | 34.61 | 33.75 |
| Bra013886.1-P | Field mustard | nucleus | 32.57 | 33.6 |
| Bra019174.1-P | Field mustard | nucleus | 33.59 | 33.33 |
| CDY49703 | Canola | nucleus | 33.59 | 33.08 |
| CDX92693 | Canola | nucleus | 33.33 | 33.08 |
| OQU76344 | Sorghum | nucleus | 30.28 | 32.87 |
| AT4G25320.1 | Thale cress | nucleus | 33.59 | 32.67 |
| EES15662 | Sorghum | cytosol, nucleus, peroxisome | 29.26 | 32.3 |
| AT5G51590.1 | Thale cress | nucleus | 34.1 | 31.98 |
| EES07975 | Sorghum | cytosol | 29.26 | 31.77 |
| CDY30710 | Canola | nucleus | 32.32 | 31.67 |
| Bra029271.1-P | Field mustard | cytosol, nucleus, peroxisome | 32.06 | 31.42 |
| Bra029164.1-P | Field mustard | nucleus | 33.33 | 30.9 |
| KXG38867 | Sorghum | plastid | 33.08 | 30.73 |
| CDY38874 | Canola | nucleus | 33.08 | 30.73 |
| CDY32624 | Canola | nucleus | 32.57 | 30.19 |
| CDY00488 | Canola | nucleus | 32.82 | 30.07 |
| Bra028265.1-P | Field mustard | nucleus | 32.57 | 29.84 |
| CDX99902 | Canola | nucleus | 32.57 | 29.16 |
| Bra022555.1-P | Field mustard | nucleus | 31.04 | 29.12 |
| CDX91598 | Canola | nucleus | 30.79 | 28.88 |
| OQU85994 | Sorghum | nucleus | 29.26 | 28.68 |
| CDY65097 | Canola | nucleus | 30.53 | 28.64 |
| KXG27470 | Sorghum | nucleus | 26.72 | 25.12 |
Protein Annotations
| EnsemblPlants:KXG24283 | EnsemblPlantsGene:SORBI_3007G020300 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF15 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:KXG24283 | ProteinID:KXG24283.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0003C6AB35 | UniProt:A0A1B6PF26 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr7:+:1904934..1909217
Molecular Weight (calculated)
40231.7 Da
IEP (calculated)
10.030
GRAVY (calculated)
-0.246
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAKPVEASA APAPAPPPMA VAPVTAAPPE ATVSFQQAAP AAEMGSSSAV LVPPLATAAA VAGGGGGAMA LGPVLMKVPK KRGRPRKYGP DGSLIRPLNA
101: TPISASAPMP TAVAPGQYTP ASAVGAAMKR GRGRPLDFAA AAAKQQQQQQ QHHHQHHHLQ HHQHQQPQQQ FGFHFNSIGD MVACSAGANF TPHIITVAPG
201: EDVTMKVISF SQQGPRAICI LSANGVISNV TLRQPDSSGG TLTYEGRFEL LSLSGSFMPT ENNGTRSRSG GMSVSLASPD GRVVGGGVAG LLVAASPVQI
301: VVGSFLPSYQ MEQKNKKPRV DAAPATVPQT PPAVPISSTD THSSEQGQQA QRGMTSTGAY GADQSWASSA QQPMAEVSRT PSSGDLKMTA SGS
101: TPISASAPMP TAVAPGQYTP ASAVGAAMKR GRGRPLDFAA AAAKQQQQQQ QHHHQHHHLQ HHQHQQPQQQ FGFHFNSIGD MVACSAGANF TPHIITVAPG
201: EDVTMKVISF SQQGPRAICI LSANGVISNV TLRQPDSSGG TLTYEGRFEL LSLSGSFMPT ENNGTRSRSG GMSVSLASPD GRVVGGGVAG LLVAASPVQI
301: VVGSFLPSYQ MEQKNKKPRV DAAPATVPQT PPAVPISSTD THSSEQGQQA QRGMTSTGAY GADQSWASSA QQPMAEVSRT PSSGDLKMTA SGS
001: MVLNMESTGE AVRSTTGNDG GITVVRSDAP SDFHVAQRSE SSNQSPTSVT PPPPQPSSHH TAPPPLQIST VTTTTTTAAM EGISGGLMKK KRGRPRKYGP
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
Arabidopsis Description
AHL1ATAHL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V7H8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.