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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • plasma membrane 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus, plasma membrane
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr1P19840_001 nucleus
GSMUA_Achr2P03170_001 nucleus
GSMUA_Achr7P06500_001 nucleus
GSMUA_AchrUn_... nucleus

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G25320.1 GSMUA_Achr1P19840_001 AT4G25320.1 23335615
AT4G25320.1 GSMUA_Achr2P03170_001 AT4G25320.1 23335615
AT4G25320.1 GSMUA_Achr7P06500_001 AT4G25320.1 23335615
AT4G25320.1 GSMUA_AchrUn_... AT4G25320.1 23335615
AT4G25320.1 GSMUA_Achr1P19840_001 AT5G51590.1 23335615
AT4G25320.1 GSMUA_Achr2P03170_001 AT5G51590.1 23335615
AT4G25320.1 GSMUA_Achr7P06500_001 AT5G51590.1 23335615
AT4G25320.1 GSMUA_AchrUn_... AT5G51590.1 23335615
AT4G25320.1 GSMUA_Achr1P19840_001 AT5G51590.1 23335615
AT4G25320.1 GSMUA_Achr2P03170_001 AT5G51590.1 23335615
AT4G25320.1 GSMUA_Achr7P06500_001 AT5G51590.1 23335615
AT4G25320.1 GSMUA_AchrUn_... AT5G51590.1 23335615
AT5G51590.1 GSMUA_Achr1P19840_001 AT5G51590.1 23335615
AT5G51590.1 GSMUA_Achr2P03170_001 AT5G51590.1 23335615
AT5G51590.1 GSMUA_Achr7P06500_001 AT5G51590.1 23335615
AT5G51590.1 GSMUA_AchrUn_... AT5G51590.1 23335615
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr7P06500_001 Banana cytosol, plasma membrane, plastid 61.26 69.64
GSMUA_Achr1P19840_001 Banana nucleus 69.37 69.55
Os08t0118000-01 Rice nucleus 53.93 55.38
TraesCS7B01G215600.1 Wheat plastid 54.97 53.3
KXG24283 Sorghum plastid 54.71 53.18
GSMUA_Achr2P03170_001 Banana cytosol, peroxisome, plasma membrane 54.19 53.08
TraesCS7D01G312100.1 Wheat plastid 54.97 52.9
TraesCS7A01G315100.1 Wheat plastid 54.97 52.76
HORVU7Hr1G075040.1 Barley plastid 54.19 52.67
Zm00001d049661_P001 Maize cytosol, peroxisome, plasma membrane 53.66 52.43
KRH34345 Soybean nucleus 43.98 50.91
KRG92455 Soybean nucleus 43.19 50.0
VIT_16s0022g01810.t01 Wine grape cytosol, nucleus, peroxisome 45.55 49.57
KRH09229 Soybean nucleus 43.98 48.84
KRH38723 Soybean nucleus 43.19 47.97
Solyc03g007150.2.1 Tomato nucleus 40.31 47.38
GSMUA_Achr5P03370_001 Banana mitochondrion, plastid 22.77 45.79
PGSC0003DMT400071865 Potato plastid 36.13 44.81
PGSC0003DMT400079651 Potato nucleus 39.53 43.64
GSMUA_Achr10P... Banana cytosol, nucleus, peroxisome 37.96 43.15
GSMUA_Achr7P20540_001 Banana nucleus 32.98 43.0
GSMUA_Achr1P03070_001 Banana cytosol, extracellular, nucleus 21.47 41.84
GSMUA_Achr5P20630_001 Banana nucleus, plasma membrane, plastid 36.13 41.44
Solyc06g035430.2.1 Tomato nucleus 37.43 41.33
GSMUA_Achr6P13410_001 Banana cytosol, nucleus, peroxisome 38.74 40.44
GSMUA_Achr6P03420_001 Banana nucleus 37.43 39.72
GSMUA_Achr2P20250_001 Banana cytosol, peroxisome, plastid 37.96 39.51
GSMUA_Achr3P03710_001 Banana nucleus 36.65 38.36
CDX94457 Canola nucleus 37.43 37.83
GSMUA_Achr8P11400_001 Banana nucleus 33.77 37.28
CDX92693 Canola nucleus 38.48 37.12
Bra019174.1-P Field mustard nucleus 38.48 37.12
CDY49703 Canola nucleus 38.48 36.84
GSMUA_Achr2P09840_001 Banana nucleus 34.29 36.69
CDX89422 Canola nucleus 36.65 36.46
GSMUA_Achr4P27240_001 Banana cytosol, extracellular, nucleus, plastid 33.51 36.36
Bra013886.1-P Field mustard nucleus 35.86 35.96
AT4G25320.1 Thale cress nucleus 37.96 35.89
GSMUA_Achr11P... Banana nucleus 34.82 35.85
GSMUA_Achr11P... Banana nucleus 35.08 35.73
GSMUA_Achr9P12360_001 Banana extracellular, vacuole 37.96 35.63
GSMUA_Achr4P30000_001 Banana nucleus 29.84 34.97
CDX87241 Canola nucleus 35.34 34.53
CDY38874 Canola nucleus 38.22 34.52
Bra035899.1-P Field mustard nucleus 35.34 34.44
CDY16785 Canola nucleus 35.34 34.44
Bra029164.1-P Field mustard nucleus 38.22 34.43
CDX86910 Canola nucleus 35.86 34.34
GSMUA_Achr5P23820_001 Banana cytosol, nucleus, plasma membrane 37.7 34.2
AT5G51590.1 Thale cress nucleus 37.43 34.13
Bra010070.1-P Field mustard nucleus 35.86 33.99
CDY00271 Canola nucleus 35.86 33.99
CDY32624 Canola nucleus 37.17 33.49
AT5G62260.3 Thale cress nucleus 35.34 33.42
CDY00488 Canola nucleus 37.17 33.1
Bra028265.1-P Field mustard nucleus 36.91 32.87
CDY30710 Canola nucleus 34.03 32.42
Bra029271.1-P Field mustard cytosol, nucleus, peroxisome 33.77 32.17
CDX99902 Canola nucleus 36.91 32.12
Bra022555.1-P Field mustard nucleus 34.29 31.26
CDX91598 Canola nucleus 34.03 31.03
CDY65097 Canola nucleus 34.03 31.03
GSMUA_Achr3P03040_001 Banana nucleus, peroxisome, plasma membrane 36.65 28.93
Protein Annotations
EnsemblPlants:GSMUA_AchrUn_randomP08550_001EnsemblPlants:GSMUA_AchrUn_randomT08550_001EnsemblPlantsGene:GSMUA_AchrUn_randomG08550_001Gene3D:3.30.1330.80InterPro:IPR005175InterPro:PPC_dom
PANTHER:PTHR31500PANTHER:PTHR31500:SF15PFAM:PF03479PFscan:PS51742SEG:segSUPFAM:SSF117856
UniParc:UPI000296720DUniProt:M0U7G5MapMan:35.1:::
Description
AT hook motif domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08550_001]
Coordinates
chrchrUn_random:+:38822856..38828333
Molecular Weight (calculated)
38722.2 Da
IEP (calculated)
8.574
GRAVY (calculated)
-0.008
Length
382 amino acids
Sequence
(BLAST)
001: MEGREGGVPS TAAAEGAGIY QPPPPPPSAS PAATVVRDEK SACPVGVTAT VMTAAASTAA AVVVGPAAAT PVAEPMKKKR GRPRKYGPDG RLLQPLNPLP
101: ISASVPSGVE YTPAAAVGAA IKRGRGGQLG MLYLAEKANV LKPLFSFQRL GCNHLLYSLL LSELCDAGDM VACSAGANFT PHIITVASGE DVTMKIISFS
201: QQGSRAICIL SANGVISNVT LRQPDSSGGT LTYEGRFELL SLSGSFMPTE NGGTRSRSGG LSVSLASPDG RVVGGGVAGL LVAASPVQVV VGSFVPSYQM
301: EQKIKKPRSE TGLVPPPTSA IPVSSAAMEE ACGSAQGKHT SSTSKPDPST ASSFQAESWA ASLQSAPGDR NSTDINISLT GS
Best Arabidopsis Sequence Match ( AT4G12080.1 )
(BLAST)
001: MVLNMESTGE AVRSTTGNDG GITVVRSDAP SDFHVAQRSE SSNQSPTSVT PPPPQPSSHH TAPPPLQIST VTTTTTTAAM EGISGGLMKK KRGRPRKYGP
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
Arabidopsis Description
AHL1ATAHL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V7H8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.