Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16785 | Canola | nucleus | 97.44 | 97.19 |
| CDY00271 | Canola | nucleus | 86.19 | 83.62 |
| CDX86910 | Canola | nucleus | 84.65 | 82.96 |
| CDY30710 | Canola | nucleus | 80.31 | 78.3 |
| AT5G62260.3 | Thale cress | nucleus | 79.28 | 76.73 |
| KRH34345 | Soybean | nucleus | 36.57 | 43.33 |
| CDY07239 | Canola | plasma membrane | 25.06 | 42.42 |
| KRG92455 | Soybean | nucleus | 35.81 | 42.42 |
| VIT_16s0022g01810.t01 | Wine grape | cytosol, nucleus, peroxisome | 37.6 | 41.88 |
| KRH09229 | Soybean | nucleus | 36.83 | 41.86 |
| Solyc03g007150.2.1 | Tomato | nucleus | 34.78 | 41.85 |
| CDX94457 | Canola | nucleus | 40.41 | 41.8 |
| CDX89422 | Canola | nucleus | 40.66 | 41.41 |
| CDX92693 | Canola | nucleus | 41.43 | 40.91 |
| CDY38874 | Canola | nucleus | 44.25 | 40.9 |
| CDY32624 | Canola | nucleus | 44.25 | 40.8 |
| KRH38723 | Soybean | nucleus | 35.81 | 40.7 |
| CDY49703 | Canola | nucleus | 41.18 | 40.35 |
| PGSC0003DMT400071865 | Potato | plastid | 31.46 | 39.94 |
| CDY07238 | Canola | nucleus | 31.97 | 39.56 |
| CDY00488 | Canola | nucleus | 42.71 | 38.93 |
| PGSC0003DMT400079651 | Potato | nucleus | 34.27 | 38.73 |
| CDY04392 | Canola | nucleus | 26.34 | 38.43 |
| GSMUA_Achr7P06500_001 | Banana | cytosol, plasma membrane, plastid | 32.99 | 38.39 |
| CDY47428 | Canola | nucleus | 29.67 | 37.54 |
| GSMUA_Achr1P19840_001 | Banana | nucleus | 36.57 | 37.53 |
| Solyc06g035430.2.1 | Tomato | nucleus | 32.99 | 37.28 |
| Os08t0118000-01 | Rice | nucleus | 35.04 | 36.83 |
| CDY65097 | Canola | nucleus | 39.39 | 36.75 |
| CDX91598 | Canola | nucleus | 39.39 | 36.75 |
| CDY41291 | Canola | nucleus | 28.64 | 36.72 |
| CDX99902 | Canola | nucleus | 41.18 | 36.67 |
| CDX84679 | Canola | nucleus | 24.55 | 36.64 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 24.55 | 36.64 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 30.18 | 35.87 |
| CDX98767 | Canola | nucleus | 29.92 | 35.56 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 34.53 | 35.34 |
| CDX82971 | Canola | plastid | 19.18 | 34.88 |
| KXG24283 | Sorghum | plastid | 35.04 | 34.86 |
| GSMUA_Achr2P03170_001 | Banana | cytosol, peroxisome, plasma membrane | 34.02 | 34.1 |
| Zm00001d049661_P001 | Maize | cytosol, peroxisome, plasma membrane | 34.02 | 34.02 |
| TraesCS7B01G215600.1 | Wheat | plastid | 34.27 | 34.01 |
| HORVU7Hr1G075040.1 | Barley | plastid | 33.5 | 33.33 |
| TraesCS7D01G312100.1 | Wheat | plastid | 33.5 | 33.0 |
| TraesCS7A01G315100.1 | Wheat | plastid | 33.5 | 32.91 |
| CDY01503 | Canola | cytosol | 21.23 | 32.05 |
| CDY26694 | Canola | cytosol, plastid | 19.18 | 28.63 |
| CDY41027 | Canola | cytosol | 19.44 | 28.57 |
| CDY25500 | Canola | nucleus | 26.85 | 28.38 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 26.09 | 28.18 |
| CDY26693 | Canola | plastid | 19.44 | 28.15 |
| CDY42495 | Canola | nucleus | 24.3 | 28.11 |
| CDY58791 | Canola | nucleus | 23.53 | 28.05 |
| CDY41028 | Canola | nucleus, plastid | 17.65 | 27.82 |
| CDX89109 | Canola | nucleus | 23.79 | 27.76 |
| CDX71746 | Canola | nucleus | 24.3 | 27.62 |
| CDY48928 | Canola | nucleus | 24.3 | 27.62 |
| CDY45364 | Canola | nucleus | 25.83 | 27.52 |
| CDY51561 | Canola | nucleus | 23.79 | 27.35 |
| CDY34355 | Canola | nucleus | 26.34 | 27.25 |
| CDY37704 | Canola | nucleus | 26.09 | 27.2 |
| CDY37070 | Canola | nucleus | 23.53 | 26.98 |
| CDY27354 | Canola | nucleus | 23.79 | 26.65 |
| CDY35172 | Canola | nucleus | 23.27 | 25.78 |
| CDY03203 | Canola | nucleus | 23.53 | 25.7 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 26.09 | 25.63 |
| CDY26692 | Canola | nucleus | 19.69 | 25.41 |
| CDY68252 | Canola | nucleus | 19.18 | 25.25 |
| CDY01506 | Canola | nucleus | 19.44 | 25.25 |
| CDX78814 | Canola | nucleus | 26.09 | 25.06 |
| CDY39751 | Canola | nucleus | 24.04 | 24.61 |
| CDY44500 | Canola | nucleus | 26.34 | 24.52 |
| CDY26691 | Canola | cytosol, plastid | 19.44 | 24.44 |
| CDY52506 | Canola | nucleus | 21.74 | 24.36 |
| CDY46385 | Canola | nucleus | 23.79 | 24.35 |
| CDY08882 | Canola | nucleus | 26.6 | 23.91 |
| CDX76549 | Canola | nucleus | 26.6 | 23.64 |
| CDY05594 | Canola | nucleus | 21.48 | 23.6 |
| CDY52477 | Canola | nucleus | 21.99 | 23.37 |
| CDY65362 | Canola | nucleus | 21.99 | 23.12 |
| CDY21122 | Canola | nucleus | 22.76 | 23.06 |
| CDY30005 | Canola | nucleus | 22.25 | 22.83 |
| CDY13231 | Canola | nucleus | 21.99 | 20.98 |
Protein Annotations
| EnsemblPlants:CDX87241 | EnsemblPlantsGene:GSBRNA2T00146179001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF18 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDX87241 | ProteinID:CDX87241.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EDF80B | MapMan:35.1 | : | : | : |
Description
BnaC09g05560D
Coordinates
chrLK031849:+:1366238..1368699
Molecular Weight (calculated)
41066.2 Da
IEP (calculated)
8.615
GRAVY (calculated)
-0.540
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKGGMSPS GVITVKGDET LAPRTEFQQN PSFLPSVGPT TVVSPLPPAP ATVTPGSAAA APPPSISSAG TDLTKKKRGR PRKYAPDGSL NPRASRPTLS
101: PTPISSSIPF SGDYHHHSHW KRGKAHQQPV EFIKRSNKFE YEISPAPPPA GLSCYMGANF TTHQFTVNAG EDVTMNVMPY SQGSRAICIL SATGTISNVT
201: LRQPTTSGGT LTYEGRFEIL SLSGSFMPTD NGGTKGRSGG MSISLAGPNG KIVGGGLAGM LIAAGPVQVI MGSFIVMHQA EQTQKKKPRI MEASPPPPQP
301: QQQPPTFTIT TVNSTSPAVA TVEEPKQQTY GGGGTMRPLS QMPSSFHNDS ITTTYHGYGN MNAGATNKEE DDYENGGDDD SGDTRSLSNS G
101: PTPISSSIPF SGDYHHHSHW KRGKAHQQPV EFIKRSNKFE YEISPAPPPA GLSCYMGANF TTHQFTVNAG EDVTMNVMPY SQGSRAICIL SATGTISNVT
201: LRQPTTSGGT LTYEGRFEIL SLSGSFMPTD NGGTKGRSGG MSISLAGPNG KIVGGGLAGM LIAAGPVQVI MGSFIVMHQA EQTQKKKPRI MEASPPPPQP
301: QQQPPTFTIT TVNSTSPAVA TVEEPKQQTY GGGGTMRPLS QMPSSFHNDS ITTTYHGYGN MNAGATNKEE DDYENGGDDD SGDTRSLSNS G
001: MEEKGEISPS GVVTVKGDEA LVPRTEFQQN PSFLQFVSPT TVVTPLPPPP APSSAPVPTT VTPGSATAST GSDPTKKKRG RPRKYAPDGS LNPRFLRPTL
101: SPTPISSSIP LSGDYQWKRG KAQQQHQPLE FVKKSHKFEY GSPAPTPPLP GLSCYVGANF TTHQFTVNGG EDVTMKVMPY SQQGSRAICI LSATGSISNV
201: TLGQPTNAGG TLTYEGRFEI LSLSGSFMPT ENGGTKGRAG GMSISLAGPN GNIFGGGLAG MLIAAGPVQV VMGSFIVMHQ AEQNQKKKPR VMEAFAPPQP
301: QAPPQLQQQQ PPTFTITTVN STSPSVNTVE EQKPQAYGGG IVRPMAQMPS SFQNDNSTMN NFTPAYHGYG NMNTGTTHKE EHEDEDGGDD DDDSGDTRSQ
401: SHSG
101: SPTPISSSIP LSGDYQWKRG KAQQQHQPLE FVKKSHKFEY GSPAPTPPLP GLSCYVGANF TTHQFTVNGG EDVTMKVMPY SQQGSRAICI LSATGSISNV
201: TLGQPTNAGG TLTYEGRFEI LSLSGSFMPT ENGGTKGRAG GMSISLAGPN GNIFGGGLAG MLIAAGPVQV VMGSFIVMHQ AEQNQKKKPR VMEAFAPPQP
301: QAPPQLQQQQ PPTFTITTVN STSPSVNTVE EQKPQAYGGG IVRPMAQMPS SFQNDNSTMN NFTPAYHGYG NMNTGTTHKE EHEDEDGGDD DDDSGDTRSQ
401: SHSG
Arabidopsis Description
AHL6AT-hook motif nuclear-localized protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.