Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52506 | Canola | nucleus | 90.17 | 91.98 |
| CDY52477 | Canola | nucleus | 84.55 | 81.79 |
| CDY65362 | Canola | nucleus | 84.83 | 81.18 |
| AT5G28590.1 | Thale cress | mitochondrion | 45.22 | 74.54 |
| CDY13231 | Canola | nucleus | 76.97 | 66.83 |
| CDY21122 | Canola | nucleus | 65.17 | 60.1 |
| CDY30005 | Canola | nucleus | 63.48 | 59.32 |
| KRH68809 | Soybean | nucleus | 45.51 | 46.82 |
| VIT_14s0081g00620.t01 | Wine grape | nucleus | 46.63 | 46.5 |
| PGSC0003DMT400073848 | Potato | nucleus | 42.13 | 45.45 |
| KRG97062 | Soybean | nucleus | 45.51 | 44.88 |
| Solyc11g006190.1.1 | Tomato | nucleus | 41.57 | 43.92 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 23.88 | 32.44 |
| CDX84679 | Canola | nucleus | 23.88 | 32.44 |
| CDY01503 | Canola | cytosol | 21.35 | 29.34 |
| CDY07239 | Canola | plasma membrane | 18.54 | 28.57 |
| CDY26693 | Canola | plastid | 21.63 | 28.52 |
| CDY41027 | Canola | cytosol | 20.79 | 27.82 |
| CDX71746 | Canola | nucleus | 26.69 | 27.62 |
| CDY48928 | Canola | nucleus | 26.69 | 27.62 |
| CDY37070 | Canola | nucleus | 26.12 | 27.27 |
| CDY42495 | Canola | nucleus | 25.84 | 27.22 |
| CDY41028 | Canola | nucleus, plastid | 18.82 | 27.02 |
| CDX89109 | Canola | nucleus | 25.28 | 26.87 |
| CDY26692 | Canola | nucleus | 22.75 | 26.73 |
| CDY68252 | Canola | nucleus | 22.19 | 26.6 |
| CDY07238 | Canola | nucleus | 23.6 | 26.58 |
| CDY27354 | Canola | nucleus | 25.84 | 26.36 |
| CDY26694 | Canola | cytosol, plastid | 19.38 | 26.34 |
| CDY25500 | Canola | nucleus | 27.25 | 26.22 |
| CDY47428 | Canola | nucleus | 22.75 | 26.21 |
| CDY58791 | Canola | nucleus | 23.6 | 25.61 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 25.56 | 25.14 |
| CDX94457 | Canola | nucleus | 26.69 | 25.13 |
| CDY51561 | Canola | nucleus | 23.88 | 25.0 |
| CDX98767 | Canola | nucleus | 23.03 | 24.92 |
| CDY01506 | Canola | nucleus | 21.07 | 24.92 |
| CDY34355 | Canola | nucleus | 26.4 | 24.87 |
| CDY45364 | Canola | nucleus | 25.56 | 24.8 |
| CDY26691 | Canola | cytosol, plastid | 21.63 | 24.76 |
| CDX92693 | Canola | nucleus | 27.53 | 24.75 |
| CDY04392 | Canola | nucleus | 18.54 | 24.63 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 22.75 | 24.62 |
| CDY49703 | Canola | nucleus | 27.53 | 24.56 |
| CDX89422 | Canola | nucleus | 26.4 | 24.48 |
| CDY41291 | Canola | nucleus | 20.51 | 23.93 |
| CDY35172 | Canola | nucleus | 23.31 | 23.51 |
| CDY03203 | Canola | nucleus | 23.31 | 23.18 |
| CDX78814 | Canola | nucleus | 26.4 | 23.1 |
| CDY37704 | Canola | nucleus | 23.88 | 22.67 |
| CDX82971 | Canola | plastid | 13.48 | 22.33 |
| CDY39751 | Canola | nucleus | 23.88 | 22.25 |
| CDY46385 | Canola | nucleus | 23.88 | 22.25 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 24.72 | 22.11 |
| CDY38874 | Canola | nucleus | 26.12 | 21.99 |
| CDY44500 | Canola | nucleus | 25.84 | 21.9 |
| CDX87241 | Canola | nucleus | 23.6 | 21.48 |
| CDY32624 | Canola | nucleus | 25.56 | 21.46 |
| CDY16785 | Canola | nucleus | 23.6 | 21.43 |
| CDY08882 | Canola | nucleus | 25.84 | 21.15 |
| CDX76549 | Canola | nucleus | 26.12 | 21.14 |
| CDY65097 | Canola | nucleus | 24.72 | 21.0 |
| CDX91598 | Canola | nucleus | 24.44 | 20.76 |
| CDY00488 | Canola | nucleus | 25.0 | 20.75 |
| CDY30710 | Canola | nucleus | 23.31 | 20.7 |
| CDX86910 | Canola | nucleus | 23.03 | 20.55 |
| CDX99902 | Canola | nucleus | 25.28 | 20.5 |
| CDY00271 | Canola | nucleus | 23.03 | 20.35 |
Protein Annotations
| EnsemblPlants:CDY05594 | EnsemblPlantsGene:GSBRNA2T00120554001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 |
| PANTHER:PTHR31500:SF22 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDY05594 | ProteinID:CDY05594.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EDC66C | MapMan:35.1 | : | : | : |
Description
BnaC02g39430D
Coordinates
chrLK031963:-:58015..60382
Molecular Weight (calculated)
37399.3 Da
IEP (calculated)
8.755
GRAVY (calculated)
-0.701
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPDERHHHH HHHQEHHLTS PYYHPFHHHT PTTVSAAPSY NGNFPPPPPN DGSSSSYHHS APSSAVTAPI EPVKRKRGRP RKYDTPAQAL AAKKLASSAS
101: SSSARERREQ AAAAAGGVSP PSKSGSKKSI SGSFGKSGQS FTPHIVNIPP GEDVAQKIIL FAEQSKHELC ILSASGAISD PSLSHRATGT SVSYQGQYEI
201: LSLRGSYFRG EHGGKTGGLS VCLSSSDGQI VGGGVGGLLK AAGPVQVILG TFQLERKKDG RNGVKGDDAS GSGHLLPSGT ESLHGYRPVM EPSGRNSNDE
301: HCTMTSGGAL GGGAHFMMQP PQGMHMTHAR PSEWGSAGYD LSGMRGNGSS ENGEYE
101: SSSARERREQ AAAAAGGVSP PSKSGSKKSI SGSFGKSGQS FTPHIVNIPP GEDVAQKIIL FAEQSKHELC ILSASGAISD PSLSHRATGT SVSYQGQYEI
201: LSLRGSYFRG EHGGKTGGLS VCLSSSDGQI VGGGVGGLLK AAGPVQVILG TFQLERKKDG RNGVKGDDAS GSGHLLPSGT ESLHGYRPVM EPSGRNSNDE
301: HCTMTSGGAL GGGAHFMMQP PQGMHMTHAR PSEWGSAGYD LSGMRGNGSS ENGEYE
001: MDPNESHHHH QQQQLHHLHQ QQQQQQQQQR LTSPYFHHQL QHHHHLPTTV ATTASTGNAV PSSNNGLFPP QPQPQHQPND GSSSLAVYPH SVPSSAVTAP
101: MEPVKRKRGR PRKYVTPEQA LAAKKLASSA SSSSAKQRRE LAAVTGGTVS TNSGSSKKSQ LGSVGKTGQC FTPHIVNIAP GEDVVQKIMM FANQSKHELC
201: VLSASGTISN ASLRQPAPSG GNLPYEGQYE ILSLSGSYIR TEQGGKSGGL SVSLSASDGQ IIGGAIGSHL TAAGPVQVIL GTFQLDRKKD AAGSGGKGDA
301: SNSGSRLTSP VSSGQLLGMG FPPGMESTGR NPMRGNDEQH DHHHHQAGLG GPHHFMMQAP QGIHMTHSRP SEWRGGGNSG HDGRGGGGYD LSGRIGHESS
401: ENGDYEQQIP D
101: MEPVKRKRGR PRKYVTPEQA LAAKKLASSA SSSSAKQRRE LAAVTGGTVS TNSGSSKKSQ LGSVGKTGQC FTPHIVNIAP GEDVVQKIMM FANQSKHELC
201: VLSASGTISN ASLRQPAPSG GNLPYEGQYE ILSLSGSYIR TEQGGKSGGL SVSLSASDGQ IIGGAIGSHL TAAGPVQVIL GTFQLDRKKD AAGSGGKGDA
301: SNSGSRLTSP VSSGQLLGMG FPPGMESTGR NPMRGNDEQH DHHHHQAGLG GPHHFMMQAP QGIHMTHSRP SEWRGGGNSG HDGRGGGGYD LSGRIGHESS
401: ENGDYEQQIP D
Arabidopsis Description
AHL14AT-hook motif nuclear-localized protein 14 [Source:UniProtKB/Swiss-Prot;Acc:A1L4X7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.