Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- mitochondrion 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025716.1-P | Field mustard | nucleus | 97.78 | 98.14 |
| CDY26694 | Canola | cytosol, plastid | 88.15 | 90.84 |
| CDY41027 | Canola | cytosol | 81.48 | 82.71 |
| CDY41028 | Canola | nucleus, plastid | 61.48 | 66.94 |
| CDY26692 | Canola | nucleus | 70.74 | 63.04 |
| CDY68252 | Canola | nucleus | 67.78 | 61.62 |
| CDY26691 | Canola | cytosol, plastid | 68.15 | 59.16 |
| CDY01506 | Canola | nucleus | 56.3 | 50.5 |
| CDY01503 | Canola | cytosol | 42.96 | 44.79 |
| CDX78814 | Canola | nucleus | 58.89 | 39.07 |
| CDY44500 | Canola | nucleus | 60.0 | 38.57 |
| CDY08882 | Canola | nucleus | 60.74 | 37.7 |
| AT4G17950.1 | Thale cress | nucleus | 60.74 | 37.36 |
| CDX76549 | Canola | nucleus | 60.74 | 37.27 |
| CDY03203 | Canola | nucleus | 44.44 | 33.52 |
| CDY35172 | Canola | nucleus | 43.7 | 33.43 |
| Solyc04g053090.1.1 | Tomato | plastid | 19.63 | 31.36 |
| GSMUA_Achr5P03370_001 | Banana | mitochondrion, plastid | 21.85 | 31.05 |
| Solyc04g053100.1.1 | Tomato | plastid | 17.78 | 28.92 |
| VIT_02s0012g00900.t01 | Wine grape | nucleus | 37.78 | 28.9 |
| CDY07239 | Canola | plasma membrane | 24.44 | 28.57 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 27.41 | 28.24 |
| CDX84679 | Canola | nucleus | 27.41 | 28.24 |
| Os10t0572900-02 | Rice | nucleus | 25.93 | 27.89 |
| HORVU2Hr1G105800.13 | Barley | cytosol, vacuole | 29.63 | 26.06 |
| PGSC0003DMT400052826 | Potato | nucleus | 34.44 | 25.83 |
| KRH58200 | Soybean | nucleus | 34.44 | 25.69 |
| KRH28286 | Soybean | plastid | 32.22 | 25.66 |
| KRH04337 | Soybean | nucleus | 32.96 | 25.0 |
| HORVU7Hr1G065300.2 | Barley | mitochondrion, plastid | 17.41 | 24.87 |
| KRH77206 | Soybean | nucleus | 31.11 | 24.85 |
| GSMUA_Achr4P27240_001 | Banana | cytosol, extracellular, nucleus, plastid | 32.22 | 24.72 |
| CDY07238 | Canola | nucleus | 28.89 | 24.68 |
| Os04t0589900-01 | Rice | nucleus | 34.44 | 24.54 |
| OQU82226 | Sorghum | plastid | 31.11 | 24.21 |
| CDX71746 | Canola | nucleus | 30.0 | 23.55 |
| CDY42495 | Canola | nucleus | 29.26 | 23.37 |
| CDY47428 | Canola | nucleus | 26.67 | 23.3 |
| CDY48928 | Canola | nucleus | 29.63 | 23.26 |
| GSMUA_Achr2P09840_001 | Banana | nucleus | 30.74 | 23.25 |
| CDY37070 | Canola | nucleus | 28.89 | 22.87 |
| CDX89109 | Canola | nucleus | 28.15 | 22.69 |
| CDY58791 | Canola | nucleus | 27.41 | 22.56 |
| Solyc08g006950.2.1 | Tomato | nucleus | 32.59 | 22.51 |
| CDX98767 | Canola | nucleus | 27.41 | 22.49 |
| Zm00001d026036_P001 | Maize | nucleus | 33.33 | 22.39 |
| CDY51561 | Canola | nucleus | 28.15 | 22.35 |
| CDY27354 | Canola | nucleus | 28.89 | 22.35 |
| CDY52506 | Canola | nucleus | 28.89 | 22.35 |
| CDX94122 | Canola | cytosol, nucleus, plasma membrane | 27.04 | 22.19 |
| CDY41291 | Canola | nucleus | 24.81 | 21.97 |
| TraesCS2A01G449500.1 | Wheat | plastid | 32.96 | 21.71 |
| CDY04392 | Canola | nucleus | 21.48 | 21.64 |
| CDY05594 | Canola | nucleus | 28.52 | 21.63 |
| TraesCS2D01G448900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 32.96 | 21.6 |
| TraesCS2B01G470900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 32.96 | 21.6 |
| CDY37704 | Canola | nucleus | 30.0 | 21.6 |
| CDY30005 | Canola | nucleus | 29.63 | 21.0 |
| CDY65362 | Canola | nucleus | 28.89 | 20.97 |
| CDY52477 | Canola | nucleus | 28.52 | 20.92 |
| CDY21122 | Canola | nucleus | 29.63 | 20.73 |
| Zm00001d030053_P003 | Maize | plastid | 31.48 | 20.38 |
| KXG38867 | Sorghum | plastid | 31.11 | 19.86 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 29.26 | 19.85 |
| Zm00001d047042_P004 | Maize | cytosol, nucleus, plasma membrane | 31.48 | 19.81 |
| CDY16785 | Canola | nucleus | 28.52 | 19.64 |
| CDX87241 | Canola | nucleus | 28.15 | 19.44 |
| CDY13231 | Canola | nucleus | 29.26 | 19.27 |
| CDY30710 | Canola | nucleus | 28.52 | 19.2 |
| CDY25500 | Canola | nucleus | 26.3 | 19.19 |
| CDX82971 | Canola | plastid | 15.19 | 19.07 |
| CDY64088 | Canola | nucleus, plasma membrane, plastid | 25.56 | 19.06 |
| CDY00271 | Canola | nucleus | 28.15 | 18.86 |
| CDY45364 | Canola | nucleus | 25.56 | 18.8 |
| CDX86910 | Canola | nucleus | 27.78 | 18.8 |
| CDX94457 | Canola | nucleus | 26.3 | 18.78 |
| CDY34355 | Canola | nucleus | 26.3 | 18.78 |
| TraesCS1B01G206100.2 | Wheat | nucleus | 31.11 | 18.63 |
| TraesCS1D01G194900.2 | Wheat | nucleus | 31.11 | 18.5 |
| TraesCS1A01G190900.1 | Wheat | nucleus | 31.11 | 18.5 |
| HORVU1Hr1G049980.12 | Barley | nucleus | 31.11 | 18.1 |
| CDX89422 | Canola | nucleus | 25.56 | 17.97 |
| CDX92693 | Canola | nucleus | 26.3 | 17.93 |
| CDY49703 | Canola | nucleus | 26.3 | 17.79 |
| CDY39751 | Canola | nucleus | 24.81 | 17.54 |
| CDY46385 | Canola | nucleus | 24.81 | 17.54 |
| CDY38874 | Canola | nucleus | 26.67 | 17.02 |
| CDY00488 | Canola | nucleus | 26.67 | 16.78 |
| CDX91598 | Canola | nucleus | 25.93 | 16.71 |
| CDY32624 | Canola | nucleus | 25.93 | 16.51 |
| CDY65097 | Canola | nucleus | 25.56 | 16.47 |
| CDX99902 | Canola | nucleus | 26.67 | 16.4 |
Protein Annotations
| EnsemblPlants:CDY26693 | EnsemblPlantsGene:GSBRNA2T00035589001 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 | PFAM:PF03479 |
| PFscan:PS51742 | ProteinID:CDY26693 | ProteinID:CDY26693.1 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI0004EE25CB |
| UniProt:A0A078GPW4 | MapMan:35.1 | : | : | : | : |
Description
BnaA06g13290DBnaA06g13290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPW4]
Coordinates
chrLK032193:+:167567..168793
Molecular Weight (calculated)
27273.0 Da
IEP (calculated)
9.762
GRAVY (calculated)
-0.344
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSKETQQQQ NRNAAAALAG PTSTSQAMHN RSSVGSLSLL QPQPLQGVMP DGSPYSASVA TQQPWRQVKR GRGRPRKYAP PDGGDSGGGA NAGPPARGRG
101: GEGLFTAHVI NINAGEDIAA KLLAFVNQKP RHVCVLSALG DVSVAELSNN PLGLGLVKYE GPYVITAMSG VFSSTESNGT VTTTGNLNVS LAGPDFKTVG
201: GRVGGMLVAG SPFQVIVGSF VPEGVKLSAA SGPDNVLNSS GGGGPGLPQS QGPSKSSEEN ASKSPGNNAQ
101: GEGLFTAHVI NINAGEDIAA KLLAFVNQKP RHVCVLSALG DVSVAELSNN PLGLGLVKYE GPYVITAMSG VFSSTESNGT VTTTGNLNVS LAGPDFKTVG
201: GRVGGMLVAG SPFQVIVGSF VPEGVKLSAA SGPDNVLNSS GGGGPGLPQS QGPSKSSEEN ASKSPGNNAQ
001: MDSREIHHQQ QQQQQQQQQQ QQQQQHLQQQ QQPPPGMLMS HHNSYNRNPN AAAAVLMGHN TSTSQAMHQR LPFGGSMSPH QPQQHQYHHP QPQQQIDQKT
101: LESLGFDGSP SSVAATQQHS MRFGIDHQQV KKKRGRPRKY AADGGGGGGG GSNIALGLAP TSPLPSASNS YGGGNEGGGG GDSAGANANS SDPPAKRNRG
201: RPPGSGKKQL DALGGTGGVG FTPHVIEVKT GEDIATKILA FTNQGPRAIC ILSATGAVTN VMLRQANNSN PTGTVKYEGR FEIISLSGSF LNSESNGTVT
301: KTGNLSVSLA GHEGRIVGGC VDGMLVAGSQ VQVIVGSFVP DGRKQKQSAG RAQNTPEPAS APANMLSFGG VGGPGSPRSQ GQQHSSESSE ENESNSPLHR
401: RSNNNNSNNH GIFGNSTPQP LHQIPMQMYQ NLWPGNSPQ
101: LESLGFDGSP SSVAATQQHS MRFGIDHQQV KKKRGRPRKY AADGGGGGGG GSNIALGLAP TSPLPSASNS YGGGNEGGGG GDSAGANANS SDPPAKRNRG
201: RPPGSGKKQL DALGGTGGVG FTPHVIEVKT GEDIATKILA FTNQGPRAIC ILSATGAVTN VMLRQANNSN PTGTVKYEGR FEIISLSGSF LNSESNGTVT
301: KTGNLSVSLA GHEGRIVGGC VDGMLVAGSQ VQVIVGSFVP DGRKQKQSAG RAQNTPEPAS APANMLSFGG VGGPGSPRSQ GQQHSSESSE ENESNSPLHR
401: RSNNNNSNNH GIFGNSTPQP LHQIPMQMYQ NLWPGNSPQ
Arabidopsis Description
AHL13AT-hook motif nuclear-localized protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q940I0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.