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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 3
  • plastid 4
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY41291 Canola nucleus 86.98 61.31
CDX98767 Canola nucleus 80.93 52.89
CDX94122 Canola cytosol, nucleus, plasma membrane 80.93 52.89
CDY04392 Canola nucleus 62.33 50.0
AT4G22770.1 Thale cress nucleus 74.88 48.2
CDY47428 Canola nucleus 62.33 43.37
KRH57315 Soybean nucleus 53.49 35.17
PGSC0003DMT400032575 Potato plastid 52.56 34.88
PGSC0003DMT400010017 Potato plastid 51.63 34.8
Solyc08g007530.2.1 Tomato nucleus 53.02 34.76
VIT_02s0025g05130.t01 Wine grape cytosol, nucleus, peroxisome 53.02 34.55
Solyc08g079630.2.1 Tomato nucleus 51.16 34.27
KRH04046 Soybean nucleus 52.56 34.14
CDY07238 Canola nucleus 40.93 27.85
CDX84679 Canola nucleus 30.23 24.81
CDX79537 Canola mitochondrion, nucleus, plastid 30.23 24.81
CDY07239 Canola plasma membrane 26.51 24.68
KXG29351 Sorghum plastid 41.86 24.0
Zm00001d015090_P001 Maize extracellular 28.37 23.02
HORVU0Hr1G015180.2 Barley cytosol, extracellular 24.65 22.46
CDY37070 Canola nucleus 34.88 21.99
TraesCS6A01G083100.1 Wheat cytosol, nucleus, peroxisome 40.47 21.97
TraesCS6D01G076900.1 Wheat nucleus 40.47 21.97
CDX94457 Canola nucleus 38.6 21.96
CDY27354 Canola nucleus 35.35 21.78
CDX89422 Canola nucleus 38.6 21.61
TraesCS6B01G114000.1 Wheat cytosol, nucleus, peroxisome 39.07 21.48
CDY49703 Canola nucleus 39.53 21.3
CDX92693 Canola nucleus 39.07 21.21
CDX89109 Canola nucleus 33.02 21.19
CDY48928 Canola nucleus 33.49 20.93
CDY42495 Canola nucleus 32.56 20.71
CDX71746 Canola nucleus 33.02 20.64
CDY51561 Canola nucleus 32.56 20.59
CDY58791 Canola nucleus 31.16 20.43
Os02t0125200-00 Rice mitochondrion 33.02 19.35
CDY25500 Canola nucleus 33.02 19.19
CDX87241 Canola nucleus 34.88 19.18
CDY16785 Canola nucleus 34.42 18.88
CDY45364 Canola nucleus 32.09 18.8
CDY64088 Canola nucleus, plasma membrane, plastid 31.63 18.78
CDY34355 Canola nucleus 33.02 18.78
CDY37704 Canola nucleus 32.56 18.67
CDY41028 Canola nucleus, plastid 21.4 18.55
CDY01503 Canola cytosol 22.33 18.53
CDY38874 Canola nucleus 36.28 18.44
CDY00271 Canola nucleus 34.42 18.36
CDX86910 Canola nucleus 33.95 18.3
CDY00488 Canola nucleus 36.28 18.18
CDY65097 Canola nucleus 35.35 18.14
CDX91598 Canola nucleus 35.35 18.14
CDY23720 Canola extracellular, plasma membrane, vacuole 33.49 18.09
CDY32624 Canola nucleus 35.35 17.92
CDX99902 Canola nucleus 36.28 17.77
CDY30710 Canola nucleus 33.02 17.71
CDY46385 Canola nucleus 28.84 16.23
CDY39751 Canola nucleus 28.84 16.23
CDY26692 Canola nucleus 22.79 16.17
CDX78814 Canola nucleus 29.77 15.72
CDY44500 Canola nucleus 29.77 15.24
CDY26693 Canola plastid 19.07 15.19
CDY03203 Canola nucleus 25.12 15.08
CDY21122 Canola nucleus 26.51 14.77
CDY08882 Canola nucleus 29.77 14.71
CDY30005 Canola nucleus 26.05 14.7
CDY01506 Canola nucleus 20.47 14.62
CDX76549 Canola nucleus 29.77 14.55
CDY35172 Canola nucleus 23.72 14.45
CDY41027 Canola cytosol 17.67 14.29
CDY26691 Canola cytosol, plastid 20.47 14.15
CDY26694 Canola cytosol, plastid 17.21 14.12
CDY52477 Canola nucleus 23.72 13.86
CDY68252 Canola nucleus 19.07 13.8
CDY65362 Canola nucleus 23.72 13.71
CDY05594 Canola nucleus 22.33 13.48
CDY52506 Canola nucleus 21.86 13.47
CDY13231 Canola nucleus 23.72 12.44
Protein Annotations
EnsemblPlants:CDX82971EnsemblPlantsGene:GSBRNA2T00138390001InterPro:IPR005175InterPro:PPC_domPANTHER:PTHR31500PANTHER:PTHR31500:SF7
PFAM:PF03479PFscan:PS51742ProteinID:CDX82971ProteinID:CDX82971.1SUPFAM:SSF117856UniParc:UPI0004EED6B1
MapMan:35.1:::::
Description
BnaC01g14210D
Coordinates
chrLK031830:-:1854016..1855299
Molecular Weight (calculated)
22764.7 Da
IEP (calculated)
8.833
GRAVY (calculated)
-0.424
Length
215 amino acids
Sequence
(BLAST)
001: MVVRSNAPSD FHIAPKSETS NPPPTSVASS LQPPQNSFAP TGPPPATEGF CTGQMKKKRG RPRKYGHDGA AVTLSPNPIS SAAPTSSHVI DFSAAGKRGR
101: VKPATESSFV RTKYQVENLG EWAPSSAGAN FTPHIITVNT GEDVTKRIIS FSQQGSLAIC VLCANGVVSS VTIRQPDSCG GTLTYEGRYE ILSLIHCRDH
201: SCQSTRTGHG AEQVE
Best Arabidopsis Sequence Match ( AT4G22770.1 )
(BLAST)
001: METTGEVVKT TTGSDGGVTV VRSNAPSDFH MAPRSETSNT PPNSVAPPPP PPPQNSFTPS AAMDGFSSGP IKKRRGRPRK YGHDGAAVTL SPNPISSAAP
101: TTSHVIDFST TSEKRGKMKP ATPTPSSFIR PKYQVENLGE WSPSSAAANF TPHIITVNAG EDVTKRIISF SQQGSLAICV LCANGVVSSV TLRQPDSSGG
201: TLTYEGRFEI LSLSGTFMPS DSDGTRSRTG GMSVSLASPD GRVVGGGVAG LLVAATPIQV VVGTFLGGTN QQEQTPKPHN HNFMSSPLMP TSSNVADHRT
301: IRPMTSSLPI STWTPSFPSD SRHKHSHDFN ITLT
Arabidopsis Description
AHL2AT-hook motif nuclear-localized protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O49658]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.