Factsheet for HORVU5Hr1G073550.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus

Predictor Summary:

nucleus 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plastid
Any Predictor:	nucleus, peroxisome, plastid
MultiLoc:	nucleus
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0491708-01	Rice	nucleus	53.06	57.94
HORVU7Hr1G051150.4	Barley	nucleus	50.51	53.95
OQU89696	Sorghum	nucleus	51.53	53.02
CDX79537	Canola	mitochondrion, nucleus, plastid	35.2	52.67
Bra022946.1-P	Field mustard	nucleus	34.95	52.29
CDX84679	Canola	nucleus	34.95	52.29
GSMUA_Achr6P03420_001	Banana	nucleus	47.96	52.22
VIT_18s0122g00700.t01	Wine grape	nucleus	46.68	51.84
GSMUA_Achr3P03710_001	Banana	nucleus	47.7	51.23
PGSC0003DMT400075370	Potato	nucleus	43.11	47.21
GSMUA_Achr9P12360_001	Banana	extracellular, vacuole	48.98	47.17
Solyc12g094710.1.1	Tomato	nucleus	42.35	46.5
Zm00001d006034_P003	Maize	nucleus	50.77	46.28
AT2G33620.2	Thale cress	nucleus	41.07	45.87
Bra021865.1-P	Field mustard	nucleus	39.8	44.57
GSMUA_Achr5P23820_001	Banana	cytosol, nucleus, plasma membrane	45.41	42.28
CDY37704	Canola	nucleus	40.31	42.13
HORVU2Hr1G105800.13	Barley	cytosol, vacuole	32.14	41.04
KRH60876	Soybean	nucleus	37.24	40.9
KRH51558	Soybean	nucleus	36.99	40.85
HORVU7Hr1G065300.2	Barley	mitochondrion, plastid	19.39	40.21
CDY23720	Canola	extracellular, plasma membrane, vacuole	40.05	39.45
HORVU0Hr1G015180.2	Barley	cytosol, extracellular	21.43	35.59
HORVU2Hr1G123730.3	Barley	plastid	18.62	34.76
HORVU1Hr1G049980.12	Barley	nucleus	38.52	32.54
Solyc12g019430.1.1	Tomato	cytosol, plastid, vacuole	15.82	32.29
HORVU5Hr1G041290.4	Barley	cytosol, nucleus, peroxisome	29.08	30.56
HORVU7Hr1G075040.1	Barley	plastid	30.61	30.53
HORVU7Hr1G027950.1	Barley	extracellular, mitochondrion, plasma membrane	16.84	27.85
PGSC0003DMT400075372	Potato	cytosol, nucleus, peroxisome	22.96	27.61
HORVU7Hr1G028110.15	Barley	plasma membrane	23.21	24.53
HORVU7Hr1G122340.3	Barley	nucleus	20.92	23.5

Protein Annotations

EMBL:AK367391	EnsemblPlants:HORVU5Hr1G073550.1	EnsemblPlantsGene:HORVU5Hr1G073550	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom
PANTHER:PTHR31500	PANTHER:PTHR31500:SF13	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856
UniParc:UPI00020070AB	UniProt:F2DU23	MapMan:35.1	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DU23]

Coordinates

chrchr5H:+:540120302..540124177

Molecular Weight (calculated)

39354.1 Da

IEP (calculated)

10.192

GRAVY (calculated)

-0.154

Length

392 amino acids

Sequence
(BLAST)

001: MMEVRASPEQ QGGMAGREPF GLPNSPPTPQ SSGPVPSMRM TYGEDGNAYF LKPGSAPPPA EAYQPVGGAG LDMPVGPDAA AGRGNGGPPF ELNMEEEAAK
101: KRGRAMKFGD DGSTSLALVP VPVPGEPTAV APGDFSQPAA KPAAGGVLAV PPVGMKKRGR PKGSTNKVKK QDKVMSALAF IGSAGAGFTP HVIAVQAGED
201: VAAKILSFAQ NGVRAVVVLS ANGAISNVTL RQSATSGGTV TYEGRFEILS LSGSFTVQDT GGHRSRTGGL SVSLASPDGR VLGGGIAGLL IACTPIQVVV
301: GTFNTVAEKK KAPKHQAAAA HEPASAPPKM TPSFVPAPIS VPLAPAPISV GMAQNSPPSR GTLSESSGSP MNQGVPAAAT PSNSGLSSMP WK

Best Arabidopsis Sequence Match ( AT2G33620.3 )
(BLAST)

001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K

Arabidopsis Description

AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.