Factsheet for Os09t0491708-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, peroxisome, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	peroxisome

nucleus: 23303719

msms PMID: 23303719 doi

Q He, L Chen, Y Xu, W Yu

State Key Laboratory for Agrobiotechnology, Institute of Plant Molecular Biology and Agricultural Biotechnology, School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0512400-02	Rice	nucleus	69.36	70.34
OQU89696	Sorghum	nucleus	74.09	69.82
CDX79537	Canola	mitochondrion, nucleus, plastid	44.01	60.31
CDX84679	Canola	nucleus	44.01	60.31
Zm00001d006034_P003	Maize	nucleus	72.14	60.23
GSMUA_Achr6P03420_001	Banana	nucleus	60.17	60.0
Bra022946.1-P	Field mustard	nucleus	43.73	59.92
GSMUA_Achr3P03710_001	Banana	nucleus	59.61	58.63
VIT_18s0122g00700.t01	Wine grape	nucleus	56.55	57.51
GSMUA_Achr9P12360_001	Banana	extracellular, vacuole	62.12	54.79
Os10t0572900-02	Rice	nucleus	37.88	54.18
HORVU5Hr1G073550.1	Barley	nucleus, peroxisome, plastid	57.94	53.06
PGSC0003DMT400075370	Potato	nucleus	50.97	51.12
AT2G33620.2	Thale cress	nucleus	49.58	50.71
Bra021865.1-P	Field mustard	nucleus	48.75	50.0
GSMUA_Achr5P23820_001	Banana	cytosol, nucleus, plasma membrane	58.5	49.88
Solyc12g094710.1.1	Tomato	nucleus	49.3	49.58
KRH60876	Soybean	nucleus	47.63	47.9
KRH51558	Soybean	nucleus	46.52	47.04
CDY37704	Canola	nucleus	49.03	46.93
CDY23720	Canola	extracellular, plasma membrane, vacuole	49.3	44.47
Os04t0589900-01	Rice	nucleus	45.4	43.01
Os06t0326000-01	Rice	nucleus	45.13	42.86
Os08t0118000-01	Rice	nucleus	39.0	37.63
Os11t0149100-01	Rice	cytosol, nucleus, peroxisome	36.21	35.52
Solyc12g019430.1.1	Tomato	cytosol, plastid, vacuole	17.83	33.33
Os12t0147000-00	Rice	nucleus	34.82	32.81
Os02t0824300-01	Rice	nucleus	35.93	32.74
PGSC0003DMT400075372	Potato	cytosol, nucleus, peroxisome	28.97	31.9
Os02t0125200-00	Rice	mitochondrion	31.48	30.79
Os04t0683900-01	Rice	nucleus	32.03	27.45

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	EntrezGene:9269918	UniProt:A1A6F0	EMBL:AK105419	InterPro:AT_hook_DNA-bd_motif
ProteinID:BAH94643.1	ProteinID:BAT08744.1	EMBL:BR000367	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:IPR005175	EnsemblPlantsGene:Os09g0491708	EnsemblPlants:Os09t0491708-01	PFAM:PF03479	InterPro:PPC_dom
PFscan:PS51742	PANTHER:PTHR31500	PANTHER:PTHR31500:SF0	SMART:SM00384	SUPFAM:SSF117856	UniParc:UPI0000ED9075
RefSeq:XP_015612473.1	RefSeq:XP_015612474.1	SEG:seg	:	:	:

Description

AT-hook motif nuclear localized protein 2Protein of unknown function DUF296 domain containing protein. (Os09t0491708-01);Protein of unknown function DUF296 domain containing protein. (Os09t0491708-02)

Coordinates

chr9:-:18964676..18968417

Molecular Weight (calculated)

35493.3 Da

IEP (calculated)

10.831

GRAVY (calculated)

-0.165

Length

359 amino acids

Sequence
(BLAST)

001: MMEVTQVRAS SEMAGGREPF VLPKSPPAAA PAPPPPSSGG MQSVRMAYTA DGTPIFAPVN SAPAPAPAAT YPPAGGNGAA ALDAGEPVVK KKRGRPRKYG
101: PDGSMSLALV PVSTAAVAAS GPFSPAAAAK SPDAVSSAPP PGAKKRGRPK GSTNKKHVPS FGIGDIGSAG AGFTPHVIFV KAGEDVSAKI MSFSQHGTRG
201: VCVLSANGAI SNVTLRQAAT SGGTVTYEGR FEILSLSGSF LLSENGGHRS RTGGLSVSLA GPDGRVLGGG VAGLLTAASP VQIVVGSFNT EGKKGPKLHA
301: PSDPMSAPLK MVPMSGTGPS SPPSRGTLSE SSGGPGSPLN QGVTASNHGQ PGLPSLSWK

Best Arabidopsis Sequence Match ( AT2G33620.3 )
(BLAST)

001: MSGSETGLMA ATRESMQFTM ALHQQQQHSQ AQPQQSQNRP LSFGGDDGTA LYKQPMRSVS PPQQYQPNSA GENSVLNMNL PGGESGGMTG TGSEPVKKRR
101: GRPRKYGPDS GEMSLGLNPG APSFTVSQPS SGGDGGEKKR GRPPGSSSKR LKLQALGSTG IGFTPHVLTV LAGEDVSSKI MALTHNGPRA VCVLSANGAI
201: SNVTLRQSAT SGGTVTYEGR FEILSLSGSF HLLENNGQRS RTGGLSVSLS SPDGNVLGGS VAGLLIAASP VQIVVGSFLP DGEKEPKQHV GQMGLSSPVL
301: PRVAPTQVLM TPSSPQSRGT MSESSCGGGH GSPIHQSTGG PYNNTINMPW K

Arabidopsis Description

AHL10AT-hook motif nuclear-localized protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O22812]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.