Factsheet for HORVU7Hr1G122340.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G015180.2
HORVU1Hr1G049980.12
HORVU1Hr1G075570.2
HORVU1Hr1G075600.2
HORVU1Hr1G086590.2
HORVU2Hr1G048590.3
HORVU2Hr1G073450.7
HORVU2Hr1G105800.13
HORVU2Hr1G123730.3
HORVU3Hr1G062030.1
HORVU3Hr1G070490.1
HORVU3Hr1G070510.2
HORVU3Hr1G073200.1
HORVU5Hr1G053460.1
HORVU7Hr1G022570.1
HORVU7Hr1G040070.1
HORVU7Hr1G065300.2
HORVU7Hr1G122340.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G63480.1	HORVU2Hr1G123730.3	AT3G61310.1	21798944
AT1G63480.1	HORVU7Hr1G122340.3	AT3G61310.1	21798944
AT1G63480.1	HORVU1Hr1G075570.2	AT5G56600.1	21798944
AT1G63480.1	HORVU1Hr1G075600.2	AT5G56600.1	21798944
AT1G63480.1	HORVU2Hr1G048590.3	AT5G56600.1	21798944
AT1G63480.1	HORVU2Hr1G073450.7	AT5G56600.1	21798944
AT1G63480.1	HORVU3Hr1G070490.1	AT5G56600.1	21798944
AT1G63480.1	HORVU3Hr1G070510.2	AT5G56600.1	21798944
AT1G63480.1	HORVU5Hr1G053460.1	AT5G56600.1	21798944
AT1G63480.1	HORVU7Hr1G022570.1	AT5G56600.1	21798944
AT1G63480.1	HORVU7Hr1G040070.1	AT5G56600.1	21798944
AT2G45850.1	HORVU0Hr1G015180.2	AT4G12080.1	21798944
AT2G45850.1	HORVU1Hr1G049980.12	AT4G17950.1	21798944
AT2G45850.1	HORVU2Hr1G105800.13	AT4G17950.1	21798944
AT2G45850.1	HORVU7Hr1G065300.2	AT4G17950.1	21798944
AT3G61310.1	HORVU1Hr1G086590.2	AT1G52240.1	21798944
AT3G61310.1	HORVU3Hr1G062030.1	AT1G52240.1	21798944
AT3G61310.1	HORVU3Hr1G073200.1	AT1G52240.1	21798944
AT3G61310.1	HORVU2Hr1G123730.3	AT2G45850.1	21798944
AT3G61310.1	HORVU7Hr1G122340.3	AT2G45850.1	21798944
AT3G61310.1	HORVU2Hr1G123730.3	AT3G61310.1	21798944
AT3G61310.1	HORVU7Hr1G122340.3	AT3G61310.1	21798944
AT3G61310.1	HORVU0Hr1G015180.2	AT4G12080.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G565900.1	Wheat	nucleus	60.74	69.06
KRH05193	Soybean	plastid	16.33	38.78
Os02t0824300-01	Rice	nucleus	42.98	38.07
OQU85994	Sorghum	nucleus	42.98	37.41
Zm00001d018515_P002	Maize	nucleus	40.97	36.86
Zm00001d051861_P001	Maize	endoplasmic reticulum, nucleus, plastid	41.83	36.5
HORVU2Hr1G123730.3	Barley	plastid	20.92	34.76
HORVU7Hr1G065300.2	Barley	mitochondrion, plastid	18.62	34.39
VIT_15s0046g02930.t01	Wine grape	nucleus, plastid	31.23	31.59
TraesCS6B01G447600.1	Wheat	nucleus	41.26	30.57
KRH65066	Soybean	nucleus	29.51	30.29
PGSC0003DMT400000467	Potato	nucleus	29.23	30.09
Solyc01g094460.2.1	Tomato	nucleus	28.94	29.79
KRH48165	Soybean	nucleus	28.94	29.71
KRH40471	Soybean	nucleus	28.94	29.62
KRH00715	Soybean	nucleus	28.94	29.53
HORVU0Hr1G015180.2	Barley	cytosol, extracellular	19.2	28.39
HORVU2Hr1G105800.13	Barley	cytosol, vacuole	24.93	28.34
Bra014444.1-P	Field mustard	nucleus	26.93	28.23
CDY42495	Canola	nucleus	26.93	27.81
CDX89109	Canola	nucleus	26.65	27.76
VIT_02s0025g03580.t01	Wine grape	nucleus	27.51	27.75
Solyc08g080960.2.1	Tomato	nucleus	26.07	27.25
CDY58791	Canola	nucleus	25.5	27.13
Bra025511.1-P	Field mustard	nucleus	21.49	27.08
Bra007595.1-P	Field mustard	nucleus	26.07	26.69
CDY51561	Canola	nucleus	25.79	26.47
CDY48928	Canola	nucleus	26.07	26.45
AT2G45850.1	Thale cress	nucleus	26.36	26.44
CDY37070	Canola	nucleus	25.79	26.39
Bra003446.1-P	Field mustard	nucleus	25.5	26.25
CDX71746	Canola	nucleus	25.79	26.16
Bra039309.1-P	Field mustard	nucleus	25.5	26.1
PGSC0003DMT400014926	Potato	plastid	25.79	26.09
Solyc08g008030.2.1	Tomato	nucleus	25.79	26.01
AT3G61310.1	Thale cress	nucleus, plastid	26.36	25.99
CDY27354	Canola	nucleus	25.79	25.79
HORVU7Hr1G027950.1	Barley	extracellular, mitochondrion, plasma membrane	16.62	24.47
CDY25500	Canola	nucleus	25.21	23.78
PGSC0003DMT400031843	Potato	plastid	26.07	23.7
KRH41165	Soybean	nucleus	23.78	23.58
CDY64088	Canola	nucleus, plasma membrane, plastid	24.07	23.2
Bra027642.1-P	Field mustard	nucleus	25.21	23.1
AT1G63470.1	Thale cress	nucleus	24.93	23.02
KRH27929	Soybean	nucleus	23.21	23.01
KRH59866	Soybean	nucleus	22.92	22.73
CDY34355	Canola	nucleus	24.36	22.49
CDY45364	Canola	nucleus	23.5	22.34
HORVU7Hr1G051150.4	Barley	nucleus	23.5	22.34
KRH77536	Soybean	nucleus	22.64	22.13
Bra027801.1-P	Field mustard	nucleus	23.5	21.87
AT1G63480.1	Thale cress	nucleus	21.78	21.05
CDY39751	Canola	nucleus	22.92	20.94
HORVU5Hr1G073550.1	Barley	nucleus, peroxisome, plastid	23.5	20.92
HORVU5Hr1G041290.4	Barley	cytosol, nucleus, peroxisome	22.35	20.91
CDY46385	Canola	nucleus	22.64	20.68
HORVU1Hr1G049980.12	Barley	nucleus	26.65	20.04
HORVU7Hr1G075040.1	Barley	plastid	21.49	19.08
HORVU7Hr1G028110.15	Barley	plasma membrane	19.48	18.33

Protein Annotations

EnsemblPlants:HORVU7Hr1G122340.3	EnsemblPlantsGene:HORVU7Hr1G122340	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom	PANTHER:PTHR31500
PANTHER:PTHR31500:SF41	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856	UniParc:UPI000B4723D3
UniProt:A0A287Y1Y9	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:655965436..655969503

Molecular Weight (calculated)

35322.5 Da

IEP (calculated)

7.790

GRAVY (calculated)

-0.478

Length

349 amino acids

Sequence
(BLAST)

001: GIHPCRAGDS SQLGFLLLLR PQSDEWTPPT PPPWRPPRAP PPPTTSTTAP PHPHPPPPSP PXPPPPPRRT TSAGRSAAAP ASTSPTAPGS SPRRRLPAPP
101: SSPSPPAPGV DPPPRSAAAD PPAPARCSSS PPSGNLSSAP SAPGSLPMSS SSHQERDVAA RIMSFSQQGP RAVCIMSASG AVSTATLHQD AGSGSVVKYE
201: GRFEILCLSG SYLVIDDGVS RTRNGGLCIA LCGADHRVIG GSVGGVLTAA GTVQVIVGSF MYAGSKKSRK GKAGQEAATG EEEQTGDANG GRGGGGVGGE
301: AEEEAPSPLM PMPRGEEELP SDAMMGGWAG MMRQMESRSC GIDINSIRE

Best Arabidopsis Sequence Match ( AT2G45850.1 )
(BLAST)

001: MDRRDAMGLS GSGSYYIHRG LSGSGPPTFH GSPQQQQGLR HLPNQNSPFG SGSTGFGSPS LHGDPSLATA AGGAGALPHH IGVNMIAPPP PPSETPMKRK
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG

Arabidopsis Description

AHL9AT-hook motif nuclear-localized protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80834]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.