Factsheet for Zm00001d018515_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001784_P002
Zm00001d009549_P002
Zm00001d010797_P001
Zm00001d012691_P001
Zm00001d012772_P001
Zm00001d012773_P003
Zm00001d015090_P001
Zm00001d018515_P002
Zm00001d026036_P001
Zm00001d026652_P001
Zm00001d030053_P003
Zm00001d036213_P002
Zm00001d038783_P001
Zm00001d038989_P002
Zm00001d043383_P001
Zm00001d043523_P001
Zm00001d043889_P001
Zm00001d047042_P004
Zm00001d051861_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G63480.1	Zm00001d001784_P002	AT3G61310.1	21798944
AT1G63480.1	Zm00001d018515_P002	AT3G61310.1	21798944
AT1G63480.1	Zm00001d026652_P001	AT3G61310.1	21798944
AT1G63480.1	Zm00001d051861_P001	AT3G61310.1	21798944
AT1G63480.1	Zm00001d010797_P001	AT5G56600.1	21798944
AT1G63480.1	Zm00001d012772_P001	AT5G56600.1	21798944
AT1G63480.1	Zm00001d012773_P003	AT5G56600.1	21798944
AT1G63480.1	Zm00001d036213_P002	AT5G56600.1	21798944
AT1G63480.1	Zm00001d038783_P001	AT5G56600.1	21798944
AT1G63480.1	Zm00001d043523_P001	AT5G56600.1	21798944
AT2G45850.1	Zm00001d015090_P001	AT4G12080.1	21798944
AT2G45850.1	Zm00001d026036_P001	AT4G17950.1	21798944
AT2G45850.1	Zm00001d030053_P003	AT4G17950.1	21798944
AT2G45850.1	Zm00001d047042_P004	AT4G17950.1	21798944
AT3G61310.1	Zm00001d009549_P002	AT1G52240.1	21798944
AT3G61310.1	Zm00001d012691_P001	AT1G52240.1	21798944
AT3G61310.1	Zm00001d038989_P002	AT1G52240.1	21798944
AT3G61310.1	Zm00001d043383_P001	AT1G52240.1	21798944
AT3G61310.1	Zm00001d043889_P001	AT1G52240.1	21798944
AT3G61310.1	Zm00001d001784_P002	AT2G45850.1	21798944
AT3G61310.1	Zm00001d018515_P002	AT2G45850.1	21798944
AT3G61310.1	Zm00001d026652_P001	AT2G45850.1	21798944
AT3G61310.1	Zm00001d051861_P001	AT2G45850.1	21798944
AT3G61310.1	Zm00001d001784_P002	AT3G61310.1	21798944
AT3G61310.1	Zm00001d018515_P002	AT3G61310.1	21798944
AT3G61310.1	Zm00001d026652_P001	AT3G61310.1	21798944
AT3G61310.1	Zm00001d051861_P001	AT3G61310.1	21798944
AT3G61310.1	Zm00001d015090_P001	AT4G12080.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85994	Sorghum	nucleus	91.49	88.53
Zm00001d051861_P001	Maize	endoplasmic reticulum, nucleus, plastid	83.76	81.25
Os02t0824300-01	Rice	nucleus	82.47	81.22
TraesCS7A01G565900.1	Wheat	nucleus	47.42	59.93
TraesCS6B01G447600.1	Wheat	nucleus	72.16	59.45
TraesCS6A01G403700.1	Wheat	nucleus	78.87	57.63
VIT_15s0046g02930.t01	Wine grape	nucleus, plastid	42.53	47.83
KRH40471	Soybean	nucleus	41.49	47.21
KRH00715	Soybean	nucleus	40.98	46.49
KRH48165	Soybean	nucleus	40.46	46.18
KRH65066	Soybean	nucleus	40.21	45.88
VIT_02s0025g03580.t01	Wine grape	nucleus	40.46	45.38
KRH05193	Soybean	plastid	17.01	44.9
PGSC0003DMT400000467	Potato	nucleus	38.66	44.25
Solyc01g094460.2.1	Tomato	nucleus	38.66	44.25
KRH27929	Soybean	nucleus	39.18	43.18
Solyc08g080960.2.1	Tomato	nucleus	37.11	43.11
PGSC0003DMT400014926	Potato	plastid	37.63	42.32
KRH77536	Soybean	nucleus	38.92	42.3
Bra014444.1-P	Field mustard	nucleus	36.08	42.04
Solyc08g008030.2.1	Tomato	nucleus	37.11	41.62
CDY51561	Canola	nucleus	36.08	41.18
CDY42495	Canola	nucleus	35.82	41.12
HORVU7Hr1G122340.3	Barley	nucleus	36.86	40.97
AT2G45850.1	Thale cress	nucleus	36.6	40.8
Bra039309.1-P	Field mustard	nucleus	35.82	40.76
CDY37070	Canola	nucleus	35.82	40.76
CDX89109	Canola	nucleus	35.05	40.6
CDY58791	Canola	nucleus	34.02	40.24
CDY27354	Canola	nucleus	36.08	40.11
Bra007595.1-P	Field mustard	nucleus	34.54	39.3
KRH59866	Soybean	nucleus	35.57	39.2
CDY48928	Canola	nucleus	34.54	38.95
CDX71746	Canola	nucleus	34.54	38.95
KRH41165	Soybean	nucleus	35.05	38.64
Bra025511.1-P	Field mustard	nucleus	27.32	38.27
AT3G61310.1	Thale cress	nucleus, plastid	34.54	37.85
CDY64088	Canola	nucleus, plasma membrane, plastid	35.31	37.85
CDY45364	Canola	nucleus	35.31	37.33
CDY25500	Canola	nucleus	35.57	37.3
Bra003446.1-P	Field mustard	nucleus	32.47	37.17
Bra027801.1-P	Field mustard	nucleus	35.82	37.07
Bra027642.1-P	Field mustard	nucleus	36.34	37.01
AT1G63470.1	Thale cress	nucleus	35.82	36.77
PGSC0003DMT400031843	Potato	plastid	36.34	36.72
CDY34355	Canola	nucleus	35.31	36.24
Zm00001d026036_P001	Maize	nucleus	37.37	36.07
Zm00001d020951_P002	Maize	cytosol, nucleus, peroxisome, plastid	30.93	35.82
AT1G63480.1	Thale cress	nucleus	32.22	34.63
Zm00001d052901_P002	Maize	nucleus	32.22	33.88
CDY39751	Canola	nucleus	33.25	33.77
Zm00001d052495_P001	Maize	cytosol, nucleus, peroxisome	30.41	33.43
CDY46385	Canola	nucleus	32.47	32.98
Zm00001d004924_P001	Maize	cytosol	30.41	32.96
Zm00001d026652_P001	Maize	plastid	32.99	32.24
Zm00001d006034_P003	Maize	nucleus	35.57	32.09
Zm00001d015090_P001	Maize	extracellular	21.91	32.08
Zm00001d047042_P004	Maize	cytosol, nucleus, plasma membrane	35.05	31.7
Zm00001d030053_P003	Maize	plastid	34.02	31.65
Zm00001d037425_P001	Maize	nucleus	28.61	31.09
Zm00001d031481_P001	Maize	nucleus, peroxisome, plasma membrane, plastid	32.73	30.83
Zm00001d049661_P001	Maize	cytosol, peroxisome, plasma membrane	29.9	29.67
Zm00001d001784_P002	Maize	nucleus	32.22	28.74
Zm00001d020950_P001	Maize	cytosol	0.77	2.56

Protein Annotations

Gene3D:3.30.1330.80	MapMan:35.1	ProteinID:AQK76328.1	ProteinID:AQK76329.1	InterPro:AT_hook_DNA-bd_motif	UniProt:B4FQV9
EMBL:BT039497	EMBL:BT039882	EMBL:BT066139	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:IPR005175	PFAM:PF03479	InterPro:PPC_dom	PRINTS:PR00929	PFscan:PS51742
PANTHER:PTHR31500	PANTHER:PTHR31500:SF41	SMART:SM00384	SUPFAM:SSF117856	UniParc:UPI00017B77AF	EnsemblPlantsGene:Zm00001d018515
EnsemblPlants:Zm00001d018515_P002	EnsemblPlants:Zm00001d018515_T002	SEG:seg	:	:	:

Description

AT-hook motif nuclear-localized protein 9

Coordinates

chr5:-:222298217..222302462

Molecular Weight (calculated)

38893.8 Da

IEP (calculated)

8.242

GRAVY (calculated)

-0.287

Length

388 amino acids

Sequence
(BLAST)

001: MDGRESTVAS GPNFSSFFAQ HRGIGAPGVP GHSQGLHAPP PGGYRQHLDA VSAGYAFQTP HVGGPSIGQG YEASPHAAQH SAGGGSGSGG CGGMDIGMGA
101: AVSADVKGDQ GSGPGQDEQV KKKRGRPRKY KPDGSVTLGL SPTSSSTPHS SSSGMGTMVN TPGSGFGSGG SGGSGSGAPS EKRGRGRPPG SGKMQQLASL
201: GKWFLGSVGT GFTPHVIIIQ PGEDVAARIM AFSQQGPRAV CIISATGAIS TATLHQDSDS GGVVTYEGRF EILCLSGSYL VVEDGGTRTR SGGLCIALCG
301: PDHRVIGGSV GGVLTAAGTV QVIVGSFMYG GSKKNKVKAE VDMEPEEVAP AEHSGMVPPA MSGGGWEAGM MRQMDSRTPA IDINSIRG

Best Arabidopsis Sequence Match ( AT2G45850.1 )
(BLAST)

001: MDRRDAMGLS GSGSYYIHRG LSGSGPPTFH GSPQQQQGLR HLPNQNSPFG SGSTGFGSPS LHGDPSLATA AGGAGALPHH IGVNMIAPPP PPSETPMKRK
101: RGRPRKYGQD GSVSLALSSS SVSTITPNNS NKRGRGRPPG SGKKQRMASV GELMPSSSGM SFTPHVIAVS IGEDIASKVI AFSQQGPRAI CVLSASGAVS
201: TATLIQPSAS PGAIKYEGRF EILALSTSYI VATDGSFRNR TGNLSVSLAS PDGRVIGGAI GGPLIAASPV QVIVGSFIWA APKIKSKKRE EEASEVVQET
301: DDHHVLDNNN NTISPVPQQQ PNQNLIWSTG SRQMDMRHAH ADIDLMRG

Arabidopsis Description

AHL9AT-hook motif nuclear-localized protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80834]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.