Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G266900.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS5B01G266500.1 | Wheat | cytosol | 100.0 | 100.0 |
| Zm00001d020950_P001 | Maize | cytosol | 97.44 | 97.44 |
| TraesCS6D01G076900.1 | Wheat | nucleus | 6.84 | 2.02 |
| TraesCS1D01G194900.2 | Wheat | nucleus | 5.13 | 1.32 |
| TraesCS2D01G597900.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 3.42 | 0.99 |
| TraesCS2D01G448900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 3.42 | 0.97 |
| TraesCS5D01G138000.1 | Wheat | plastid | 2.56 | 0.82 |
| TraesCS5D01G274900.1 | Wheat | plastid | 1.71 | 0.68 |
| Zm00001d020951_P002 | Maize | cytosol, nucleus, peroxisome, plastid | 1.71 | 0.6 |
| TraesCS7D01G247300.2 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 1.71 | 0.54 |
| TraesCS5B01G266600.1 | Wheat | endoplasmic reticulum, mitochondrion, nucleus, peroxisome | 1.71 | 0.51 |
| TraesCS5A01G267000.1 | Wheat | nucleus, peroxisome, vacuole | 1.71 | 0.5 |
| TraesCS7D01G312100.1 | Wheat | plastid | 1.71 | 0.5 |
| Solyc02g082300.2.1 | Tomato | nucleus, plastid | 0.85 | 0.38 |
| Solyc02g038760.2.1 | Tomato | nucleus | 0.85 | 0.31 |
| PGSC0003DMT400059682 | Potato | nucleus | 0.85 | 0.31 |
| PGSC0003DMT400035486 | Potato | nucleus, plastid | 0.0 | 0.0 |
| TraesCS7D01G133700.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS7D01G134100.1 | Wheat | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G274800.1 | EnsemblPlantsGene:TraesCS5D01G274800 | ncoils:Coil | PANTHER:PTHR35715 | PANTHER:PTHR35715:SF3 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:377532187..377534591
Molecular Weight (calculated)
13721.4 Da
IEP (calculated)
6.845
GRAVY (calculated)
-0.955
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVRIKAVVD RFVKELQEAL DADIQDRIMK EREMQSYIQE REREVAEREA AWKAELSRRE AEIARQEARL KMEKENLEKE KSVLMGTASN QDNQDGALEI
101: TVSGEKYRCL RFSKAKK
101: TVSGEKYRCL RFSKAKK
001: MSLRIKLVVD KFVEELKQAL DADIQDRIMK EREMQSYIEE REREVAEREA AWKAELSRRE TEIARQEARL KMERENLEKE KSVLMGTASN QDNQDGALEI
101: TVSGEKYRCL RFSKAKK
101: TVSGEKYRCL RFSKAKK
Arabidopsis Description
At2g17350 [Source:UniProtKB/TrEMBL;Acc:Q8L8N3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.