Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G035400.1 | Wheat | cytosol | 79.57 | 91.5 |
| TraesCS7A01G134300.1 | Wheat | cytosol | 77.83 | 90.86 |
| HORVU7Hr1G027950.1 | Barley | extracellular, mitochondrion, plasma membrane | 73.48 | 71.31 |
| TraesCS7D01G134100.1 | Wheat | nucleus | 59.13 | 37.57 |
| OQU76344 | Sorghum | nucleus | 32.61 | 20.72 |
| Os06t0326000-01 | Rice | nucleus | 33.91 | 20.63 |
| VIT_18s0122g00700.t01 | Wine grape | nucleus | 31.3 | 20.4 |
| PGSC0003DMT400075370 | Potato | nucleus | 31.74 | 20.39 |
| CDX79537 | Canola | mitochondrion, nucleus, plastid | 23.04 | 20.23 |
| CDX84679 | Canola | nucleus | 23.04 | 20.23 |
| Zm00001d037425_P001 | Maize | nucleus | 31.3 | 20.17 |
| TraesCS5D01G274900.1 | Wheat | plastid | 25.65 | 20.14 |
| Bra022946.1-P | Field mustard | nucleus | 22.61 | 19.85 |
| GSMUA_Achr3P03710_001 | Banana | nucleus | 31.3 | 19.73 |
| Solyc12g094710.1.1 | Tomato | nucleus | 30.43 | 19.61 |
| GSMUA_Achr6P03420_001 | Banana | nucleus | 30.43 | 19.44 |
| TraesCS7D01G247300.2 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 29.57 | 18.38 |
| AT2G33620.2 | Thale cress | nucleus | 27.83 | 18.23 |
| GSMUA_Achr9P12360_001 | Banana | extracellular, vacuole | 31.74 | 17.94 |
| TraesCS7D01G312100.1 | Wheat | plastid | 30.43 | 17.63 |
| PGSC0003DMT400075372 | Potato | cytosol, nucleus, peroxisome | 24.78 | 17.48 |
| Bra021865.1-P | Field mustard | nucleus | 26.09 | 17.14 |
| GSMUA_Achr5P23820_001 | Banana | cytosol, nucleus, plasma membrane | 30.0 | 16.39 |
| KRH51558 | Soybean | nucleus | 24.78 | 16.06 |
| KRH60876 | Soybean | nucleus | 24.78 | 15.97 |
| TraesCS5D01G138000.1 | Wheat | plastid | 25.22 | 15.8 |
| CDY37704 | Canola | nucleus | 25.65 | 15.73 |
| TraesCS6D01G076900.1 | Wheat | nucleus | 26.96 | 15.66 |
| CDY23720 | Canola | extracellular, plasma membrane, vacuole | 26.96 | 15.58 |
| TraesCS2D01G448900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 25.65 | 14.32 |
| TraesCS1D01G194900.2 | Wheat | nucleus | 27.39 | 13.88 |
| TraesCS2D01G597900.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 22.17 | 12.59 |
| Solyc12g019430.1.1 | Tomato | cytosol, plastid, vacuole | 10.43 | 12.5 |
| TraesCS5D01G274800.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G133700.1 | EnsemblPlantsGene:TraesCS7D01G133700 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31500 | PFAM:PF03479 |
| PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 | TIGR:cd11378 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr7D:-:84803289..84807729
Molecular Weight (calculated)
23017.2 Da
IEP (calculated)
4.552
GRAVY (calculated)
-0.009
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MADHLTNDHI TELTKGVTSN LFGNTINLAM EGGGAIPAGA GKAAYGAGPP KSPLHPQPQP TLGARLADAE LEPCAAEIVP QIIIVQGGQD VAMEVKSYGG
101: NGWAVFIMSA EGAVSNVTLH QPASPLETVI HKGCFDIVSM TGSYLPSKTD GVSSLKGGFA ISLVGADGRI FGGGLAGPLI AASPVQVVIG RFAAGEKEET
201: KQDVASGTPG ATEPSDSPSG SSSDPGSPSN
101: NGWAVFIMSA EGAVSNVTLH QPASPLETVI HKGCFDIVSM TGSYLPSKTD GVSSLKGGFA ISLVGADGRI FGGGLAGPLI AASPVQVVIG RFAAGEKEET
201: KQDVASGTPG ATEPSDSPSG SSSDPGSPSN
001: MVLNMESTGE AVRSTTGNDG GITVVRSDAP SDFHVAQRSE SSNQSPTSVT PPPPQPSSHH TAPPPLQIST VTTTTTTAAM EGISGGLMKK KRGRPRKYGP
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
101: DGTVVALSPK PISSAPAPSH LPPPSSHVID FSASEKRSKV KPTNSFNRTK YHHQVENLGE WAPCSVGGNF TPHIITVNTG EDVTMKIISF SQQGPRSICV
201: LSANGVISSV TLRQPDSSGG TLTYEGRFEI LSLSGSFMPN DSGGTRSRTG GMSVSLASPD GRVVGGGLAG LLVAASPVQV VVGSFLAGTD HQDQKPKKNK
301: HDFMLSSPTA AIPISSAADH RTIHSVSSLP VNNNTWQTSL ASDPRNKHTD INVNVT
Arabidopsis Description
AHL1ATAHL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V7H8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.