Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G045100.1 | Wheat | peroxisome | 97.25 | 97.63 |
| TraesCS2B01G057300.1 | Wheat | peroxisome | 95.54 | 94.68 |
| Os04t0101800-01 | Rice | cytosol, mitochondrion, peroxisome, plastid | 66.84 | 74.02 |
| Zm00001d024940_P001 | Maize | peroxisome | 70.25 | 72.73 |
| Zm00001d004553_P001 | Maize | peroxisome | 71.04 | 72.27 |
| OQU81040 | Sorghum | peroxisome | 66.06 | 70.49 |
| GSMUA_Achr4P20870_001 | Banana | cytosol, mitochondrion, nucleus, peroxisome | 50.46 | 52.6 |
| GSMUA_Achr4P22090_001 | Banana | nucleus | 49.15 | 52.45 |
| GSMUA_Achr7P01890_001 | Banana | mitochondrion | 48.49 | 51.82 |
| GSMUA_Achr5P14740_001 | Banana | mitochondrion | 46.0 | 50.72 |
| VIT_07s0205g00030.t01 | Wine grape | nucleus | 43.12 | 50.15 |
| VIT_18s0001g08100.t01 | Wine grape | plastid | 44.69 | 45.05 |
| PGSC0003DMT400078676 | Potato | plastid | 41.81 | 44.87 |
| Solyc02g091710.2.1 | Tomato | plastid | 42.07 | 44.71 |
| KRH45468 | Soybean | cytosol, peroxisome | 23.59 | 44.66 |
| Solyc04g076860.2.1 | Tomato | nucleus | 43.38 | 44.13 |
| PGSC0003DMT400016355 | Potato | nucleus | 42.86 | 43.37 |
| KRH39527 | Soybean | extracellular, golgi | 30.41 | 42.88 |
| KRH74431 | Soybean | mitochondrion | 38.14 | 42.79 |
| CDY28148 | Canola | plastid | 37.35 | 41.97 |
| AT5G49665.1 | Thale cress | plastid | 40.24 | 41.49 |
| KRH75634 | Soybean | nucleus | 35.12 | 41.36 |
| KRH72527 | Soybean | nucleus | 35.26 | 41.32 |
| Bra017859.1-P | Field mustard | plastid | 34.08 | 41.14 |
| CDY25618 | Canola | nucleus, peroxisome, plastid | 35.52 | 40.94 |
| Bra030218.1-P | Field mustard | nucleus | 36.04 | 40.92 |
| CDY31616 | Canola | nucleus | 36.17 | 40.17 |
| KRH16916 | Soybean | nucleus | 35.39 | 40.06 |
| Bra040498.1-P | Field mustard | plastid | 38.14 | 39.97 |
| CDX89500 | Canola | cytosol, peroxisome, plastid | 35.26 | 39.97 |
| CDX72660 | Canola | cytosol, nucleus, peroxisome, plastid | 35.78 | 39.85 |
| AT2G22680.1 | Thale cress | cytosol, peroxisome, plastid | 35.39 | 39.53 |
| CDY45010 | Canola | mitochondrion, peroxisome | 37.35 | 39.15 |
| Bra024408.1-P | Field mustard | plastid | 35.39 | 38.14 |
| CDY08765 | Canola | plastid | 35.26 | 37.99 |
| AT4G37890.1 | Thale cress | nucleus | 36.04 | 37.21 |
| Bra031849.1-P | Field mustard | plastid | 34.34 | 37.01 |
| CDY45614 | Canola | plastid | 34.21 | 36.66 |
| CDY52535 | Canola | plastid | 34.08 | 36.62 |
| AT5G65683.1 | Thale cress | peroxisome, plastid | 33.16 | 35.29 |
| CDY37838 | Canola | plastid | 21.89 | 33.4 |
| KRH45469 | Soybean | nucleus | 7.34 | 31.64 |
| TraesCS2D01G357400.1 | Wheat | cytosol, nucleus, peroxisome | 22.8 | 26.93 |
| TraesCS5D01G348200.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 19.79 | 26.58 |
| TraesCS6D01G207700.2 | Wheat | mitochondrion | 24.12 | 25.92 |
| TraesCS2D01G361900.1 | Wheat | mitochondrion | 23.46 | 25.87 |
| TraesCS1D01G433500.1 | Wheat | cytosol | 19.92 | 25.81 |
| TraesCS5D01G472700.1 | Wheat | cytosol | 19.92 | 25.33 |
| TraesCS6D01G360000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 23.98 | 24.8 |
| TraesCS1D01G144900.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome, plastid | 21.49 | 24.01 |
| TraesCS4D01G339200.1 | Wheat | mitochondrion | 22.02 | 23.76 |
| TraesCS4D01G339300.1 | Wheat | cytosol | 23.07 | 23.5 |
| TraesCS2D01G459400.1 | Wheat | mitochondrion | 15.86 | 23.09 |
| TraesCS5D01G182800.1 | Wheat | cytosol, plastid | 16.51 | 22.18 |
| TraesCS4D01G351600.1 | Wheat | plastid | 15.33 | 20.63 |
| TraesCS7D01G010200.1 | Wheat | cytosol | 14.15 | 20.61 |
| TraesCS5D01G016400.1 | Wheat | cytosol | 12.84 | 20.25 |
| TraesCS7D01G434400.1 | Wheat | cytosol | 13.76 | 20.15 |
| TraesCS3D01G516600.1 | Wheat | cytosol | 13.5 | 19.73 |
| TraesCS5D01G016600.1 | Wheat | cytosol | 12.98 | 18.93 |
| TraesCS7D01G418800.1 | Wheat | cytosol, peroxisome, plasma membrane | 12.58 | 13.19 |
| TraesCS6D01G009300.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 11.4 | 11.76 |
| TraesCS5D01G016700.1 | Wheat | mitochondrion | 11.8 | 10.48 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G043700.1 | EnsemblPlantsGene:TraesCS2D01G043700 | Gene3D:3.30.40.10 | Gene3D:3.40.50.410 | InterPro:IPR001841 | InterPro:IPR002035 |
| InterPro:IPR013083 | InterPro:IPR036465 | InterPro:VWF_A | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:vWFA_dom_sf |
| PANTHER:PTHR10579 | PANTHER:PTHR10579:SF55 | PFAM:PF13519 | PFAM:PF17123 | PFscan:PS50089 | PFscan:PS50234 |
| SEG:seg | SMART:SM00184 | SUPFAM:SSF53300 | SUPFAM:SSF57850 | MapMan:26.3.1.6 | : |
Description
No Description!
Coordinates
chr2D:-:15731041..15734216
Molecular Weight (calculated)
80216.4 Da
IEP (calculated)
10.348
GRAVY (calculated)
-0.392
Length
763 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTGWRRALC TSVSRDDSSD GGGSGSAKRR PPPARGDAPA TPRKLAFFSG MGGGGGGNPS APALRCRTKP TAEPESVAPV MPPQPASAPV SARKRVPLLQ
101: AISAPSSPRS PSRFALFKAS ILPTKARCGV CTRGVKNGGG AAVFTAECSH SFHFPCIAAR ARGAASGALC CPVCSAPWRQ APFLASLRLH LDVDGSPHRK
201: RRTSDDSRKA APPPQTKAAG VPKVYDDDEP LLAPKSAANG SGFNPIPEAD EDEGEGEGEE AGREGEFRGF FPHPPRARTG LAVTVAPEAA LVSSGRRHGK
301: YVVVVKVKAP GLRSSASRRA PIDLVTVLDV SQGMMGEKLQ MLKRGMRLVI ASLGPADRLS VVAFSGAAKR LMPLRRMSRQ GQRSARQIVD RLVVCAAAQG
401: QEQAQSACAG DALRKATKVL EDRRDRNPVA TVMLLSDTQQ QQDARKHGDH HHSLRRPQAA PAAATRFTHV EIPIAGPADD APARSPLAPK EEHLESSAPA
501: EHAFAKCLGG LVSVVMQEVH LELAFPTGEI TAVYSCGAGQ HAVALAGGAG GNGGSALSVR LGEMYAEEER ELLVELRAPL GAHPHSLSVR CAYRDPASQE
601: TVRGAEQPLL LPPLHDGGGG GSSTSSQQRL HDLFVATRAV AESRRLAELS DFSTATHLLS SARRLVLQSP PTQQQQDLLG GLDTELSDMR WRRGQQQPPT
701: PTSRSATPSG TPRASSGGGG GAGGEPLTPT SAWRAAEQLA KVAIMRKSMN RVSDLHGFEN ARF
101: AISAPSSPRS PSRFALFKAS ILPTKARCGV CTRGVKNGGG AAVFTAECSH SFHFPCIAAR ARGAASGALC CPVCSAPWRQ APFLASLRLH LDVDGSPHRK
201: RRTSDDSRKA APPPQTKAAG VPKVYDDDEP LLAPKSAANG SGFNPIPEAD EDEGEGEGEE AGREGEFRGF FPHPPRARTG LAVTVAPEAA LVSSGRRHGK
301: YVVVVKVKAP GLRSSASRRA PIDLVTVLDV SQGMMGEKLQ MLKRGMRLVI ASLGPADRLS VVAFSGAAKR LMPLRRMSRQ GQRSARQIVD RLVVCAAAQG
401: QEQAQSACAG DALRKATKVL EDRRDRNPVA TVMLLSDTQQ QQDARKHGDH HHSLRRPQAA PAAATRFTHV EIPIAGPADD APARSPLAPK EEHLESSAPA
501: EHAFAKCLGG LVSVVMQEVH LELAFPTGEI TAVYSCGAGQ HAVALAGGAG GNGGSALSVR LGEMYAEEER ELLVELRAPL GAHPHSLSVR CAYRDPASQE
601: TVRGAEQPLL LPPLHDGGGG GSSTSSQQRL HDLFVATRAV AESRRLAELS DFSTATHLLS SARRLVLQSP PTQQQQDLLG GLDTELSDMR WRRGQQQPPT
701: PTSRSATPSG TPRASSGGGG GAGGEPLTPT SAWRAAEQLA KVAIMRKSMN RVSDLHGFEN ARF
001: MGTGWRRAFC TTAPRNSDAA APDLDKQRTG YNLTPSPSPR SCVKLAFLSG GSNPSTPRST SSPSLRCRTA DAQTPTAEQT STPRSATKSP RLSLAAISNP
101: SSPRSPLKLS LFRNSFKFRS TCGICLNSVK TGQGTAKYTA ECSHAFHFPC IADYVRKQGK LVCPVCNSIW KDASLLVPHK NATESPLDDS VSVIQEKRVV
201: VTSSPRAKPR PKQSDYSRFY DDDEPLLSPR FVTIPEADEN CGGEEEDDVP QFKGFVVDPN PSFAVKTNEI PVNGRDFGNV QVSLLPEAAV VSVGCGYETR
301: AVALRVKAPP PLTARGGVGR RLLDPSQRAP VDLVVVVDVG GTMNGAKLQM VKRAMRLVIS SLGSADRLSI VAVVMTVPKR LLPLKRMTEH GKRSAGAVVD
401: GLLCGQGSNT SEALKKASRV LEDRRERNPV ASIVLLTDGQ GQLSKVHTNQ RSTITNVGST RFAHIEIPVT EHGFGESGGC SNAPAEEAFA KCIGGLLSVV
501: VQDLRIQIRV GSGSGPCEIS AIYLCNGRPT LVSSGSGSVR LGDLYAGEER ELLVELRVPS TATRAYQILS VRGLFKDPST QEVVYGRDQS LRVPQAVRSS
601: SSPRIERLRS LFIATRAVAE SRRLVEYGEC TSAYHLLTSA RALLGQSGTV EAAEYIKVVE AELVEVQWRG QQLMEYQSQH QQQHNQRRRG SERETTTTMT
701: LMDENGEPLT PASAWRAAEK LAKLAMMKKS DLHGFENARF
101: SSPRSPLKLS LFRNSFKFRS TCGICLNSVK TGQGTAKYTA ECSHAFHFPC IADYVRKQGK LVCPVCNSIW KDASLLVPHK NATESPLDDS VSVIQEKRVV
201: VTSSPRAKPR PKQSDYSRFY DDDEPLLSPR FVTIPEADEN CGGEEEDDVP QFKGFVVDPN PSFAVKTNEI PVNGRDFGNV QVSLLPEAAV VSVGCGYETR
301: AVALRVKAPP PLTARGGVGR RLLDPSQRAP VDLVVVVDVG GTMNGAKLQM VKRAMRLVIS SLGSADRLSI VAVVMTVPKR LLPLKRMTEH GKRSAGAVVD
401: GLLCGQGSNT SEALKKASRV LEDRRERNPV ASIVLLTDGQ GQLSKVHTNQ RSTITNVGST RFAHIEIPVT EHGFGESGGC SNAPAEEAFA KCIGGLLSVV
501: VQDLRIQIRV GSGSGPCEIS AIYLCNGRPT LVSSGSGSVR LGDLYAGEER ELLVELRVPS TATRAYQILS VRGLFKDPST QEVVYGRDQS LRVPQAVRSS
601: SSPRIERLRS LFIATRAVAE SRRLVEYGEC TSAYHLLTSA RALLGQSGTV EAAEYIKVVE AELVEVQWRG QQLMEYQSQH QQQHNQRRRG SERETTTTMT
701: LMDENGEPLT PASAWRAAEK LAKLAMMKKS DLHGFENARF
Arabidopsis Description
WAV3E3 ubiquitin-protein ligase WAV3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.