Factsheet for TraesCS2D01G357400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G377900.1	Wheat	cytosol	94.27	94.27
TraesCS2A01G358400.2	Wheat	cytosol, nucleus, peroxisome	95.2	94.18
HORVU0Hr1G005150.3	Barley	cytosol, vacuole	91.95	80.93
EER95529	Sorghum	nucleus	63.62	63.23
TraesCS4D01G339300.1	Wheat	cytosol	70.12	60.48
OQU93258	Sorghum	cytosol	62.69	57.69
TraesCS5D01G348200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	47.68	54.23
Zm00001d027621_P001	Maize	cytosol	62.23	53.74
TraesCS5D01G472700.1	Wheat	cytosol	47.68	51.33
TraesCS1D01G433500.1	Wheat	cytosol	46.28	50.76
TraesCS1D01G144900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome, plastid	50.77	48.02
TraesCS2D01G459400.1	Wheat	mitochondrion	35.91	44.27
TraesCS4D01G351600.1	Wheat	plastid	38.08	43.39
TraesCS6D01G207700.2	Wheat	mitochondrion	45.05	40.99
TraesCS2D01G361900.1	Wheat	mitochondrion	42.88	40.03
TraesCS4D01G339200.1	Wheat	mitochondrion	42.11	38.47
TraesCS6D01G360000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	41.64	36.45
TraesCS5D01G016400.1	Wheat	cytosol	19.66	26.24
TraesCS7D01G010200.1	Wheat	cytosol	21.21	26.14
TraesCS7D01G434400.1	Wheat	cytosol	20.43	25.34
TraesCS5D01G016600.1	Wheat	cytosol	19.81	24.47
TraesCS3D01G516600.1	Wheat	cytosol	19.35	23.95
TraesCS2D01G043700.1	Wheat	peroxisome	26.93	22.8
TraesCS5D01G182800.1	Wheat	cytosol, plastid	17.8	20.25
TraesCS7D01G418800.1	Wheat	cytosol, peroxisome, plasma membrane	20.43	18.13
TraesCS6D01G009300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	20.74	18.11
TraesCS5D01G016700.1	Wheat	mitochondrion	20.12	15.13

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083
InterPro:IPR036465	PFAM:PF13768	PFAM:PF14624	PFAM:PF17123	PFscan:PS50089	PFscan:PS50234
PANTHER:PTHR10579	PANTHER:PTHR10579:SF72	SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850
EnsemblPlantsGene:TraesCS2D01G357400	EnsemblPlants:TraesCS2D01G357400.1	InterPro:VWF_A	InterPro:Vwaint_dom	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
TIGR:cd16448	SEG:seg	InterPro:vWFA_dom_sf	:	:	:

Description

No Description!

Coordinates

chr2D:-:459333310..459335369

Molecular Weight (calculated)

68641.1 Da

IEP (calculated)

6.423

GRAVY (calculated)

-0.185

Length

646 amino acids

Sequence
(BLAST)

001: MEGTKQMNPC AICLGGMGAG GGQAIFTAEC SHTFHFHCIS TSVEHGNLLC PLCNAQWREL PFVRPPASMP TTQPPSVDVV QPRRVRAHSE DPVVFDDDEQ
101: VGPPDSRRQA GAASDEAVVV KTHGHYSAVA RDSSDDNFAV LVHLKAPGIT GSGAEAAGGA PAQRAPVDLV TVLDVSSSMH GSKLALLKQA MRFVIDILGP
201: DDRLSVVSFS SRARRVTRLT RMSDAGKALC VRAVESLTAR TGTNVAEGLR TAARVLDERR YRNGVSSVVL LSDGQDNYTP MRQAFGRGLP NYAALVPPSF
301: ARTGTGAGDR ATPVHTFGFG NDHDAAAMHA VSEVTGGTFS FIENEAVIQD AFAQCVGGLL SVVVQEARVA VQCLHPGVRV GSVKSGLYQS LVNEDGRAAS
401: IVVGELYADE ERRFLLFLVV PRAEETDGDL TALIKVSCLY RDAAAGAEVN VVAEDTVVAR PEHAVDAERS VEVERERVRV EATEDMAAAR AAAERGGHQE
501: AVEILENRRG AVAQSDAARS GDPMIVALEI ELRDMRRRVS SRQDYARSGR ASMLAGMSAH MQQRGSSSQL QLPSVIAFQD GAVTTTAATH QVSQQAATLP
601: YATPAMLAML LRSRRAREAS AASGQRQPGA PEGAHGSEPT VPKELN

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.