Factsheet for TraesCS2A01G358400.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G357400.1	Wheat	cytosol, nucleus, peroxisome	94.18	95.2
TraesCS2B01G377900.1	Wheat	cytosol	92.96	93.96
HORVU0Hr1G005150.3	Barley	cytosol, vacuole	91.73	81.61
TraesCS5A01G513100.1	Wheat	cytosol, plastid	49.31	65.18
EER95529	Sorghum	nucleus	63.55	63.85
TraesCS5A01G513000.1	Wheat	cytosol	70.29	62.03
OQU93258	Sorghum	cytosol	64.01	59.54
TraesCS5A01G284900.1	Wheat	cytosol, mitochondrion, plastid	24.96	56.6
Zm00001d027621_P001	Maize	cytosol	63.09	55.08
TraesCS7A01G423300.1	Wheat	cytosol	47.32	52.2
TraesCS5A01G359200.1	Wheat	cytosol, peroxisome, plastid	41.04	51.15
TraesCS3A01G393700.1	Wheat	cytosol	40.28	49.91
TraesCS1A01G421500.1	Wheat	plastid	42.11	43.72
TraesCS6A01G227300.1	Wheat	mitochondrion	44.1	40.51
TraesCS2A01G364100.2	Wheat	cytosol, mitochondrion	42.27	39.66
TraesCS5A01G512800.2	Wheat	mitochondrion	41.5	38.33
TraesCS6A01G375500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	40.89	36.33
TraesCS1A01G146700.1	Wheat	mitochondrion	33.54	33.74
TraesCS4A01G484700.1	Wheat	cytosol, unclear	21.59	26.91
TraesCS7A01G010300.1	Wheat	nucleus, unclear	21.29	26.53
TraesCS5A01G011500.1	Wheat	cytosol	19.91	26.0
TraesCS5A01G011700.1	Wheat	cytosol	19.75	24.52
TraesCS2A01G045100.1	Wheat	peroxisome	26.8	23.03
TraesCS5A01G178300.1	Wheat	mitochondrion	17.92	22.2
TraesCS6A01G006500.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	19.91	18.39
TraesCS7A01G426800.1	Wheat	cytosol, peroxisome, plasma membrane	19.75	17.79
TraesCS5A01G011800.1	Wheat	plastid	19.14	14.72

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083
InterPro:IPR036465	PFAM:PF13768	PFAM:PF14624	PFAM:PF17123	PFscan:PS50089	PFscan:PS50234
PANTHER:PTHR10579	PANTHER:PTHR10579:SF72	SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850
EnsemblPlantsGene:TraesCS2A01G358400	EnsemblPlants:TraesCS2A01G358400.2	InterPro:VWF_A	InterPro:Vwaint_dom	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
TIGR:cd16448	SEG:seg	InterPro:vWFA_dom_sf	:	:	:

Description

No Description!

Coordinates

chr2A:-:602651167..602653245

Molecular Weight (calculated)

69512.3 Da

IEP (calculated)

6.554

GRAVY (calculated)

-0.203

Length

653 amino acids

Sequence
(BLAST)

001: MEGTKQMNPC AICLGGMGAG GGQAIFTAEC SHTFHFHCIS ASVEHGNLLC PLCNAQWREL PFVRPPASMP PTQPPPPPPS VDVVQPAHPR RVRTHSVDPV
101: VFDDDEQVTP PDGRRQAGAA SDEAVVVKTH IHYSAIARDS SDDNFAVLVH LKAPGITGSG TEAAGDAPAQ RAPVDLVTVL DVSSSMHGSK LALLKQAMRF
201: VIDILGPDDR LSVVSFSSRA RRVTRLTRMS DAGKALCVRA VESLTARTGT NIAEGLRTAA RVLDERRYRN GVSSVVLLSD GQDNYTPMRQ AFGRGLPNYA
301: ALVPPSFART GTGAGDRATP VHTFGFGNDH DAAAMHAVSE ATGGTFSFIE NEAVIQDAFA QCVGGLLSVV VQEARLAIQC LHPGVRIGSV KSGLYESRVD
401: EDGRAASIVV GELYADEERR FLLFLVVPRA EATDGDVTAL IRVNCLYRDA AAGADVNVTG EDTVVARPEH AVDAERSVEV ERERVRVEAT EDMAAARAAA
501: ERGGHQEAVE ILENRRGAVA QSDAARGGDP MIVALEIELR DMRRRVSTRQ NYARSGRASM LAGMSAHMQQ RGSSSQLQLP SVIAFHDGAV TTTAATHQVL
601: QQAATLPYAT PAMLAMLLRS RRAREASAAS GQRQPGAPEG AQGSEPTVPK ELN

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.