Subcellular Localization
min:
: max
Winner_takes_all: vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G357400.1 | Wheat | cytosol, nucleus, peroxisome | 80.93 | 91.95 |
| TraesCS2A01G358400.2 | Wheat | cytosol, nucleus, peroxisome | 81.61 | 91.73 |
| TraesCS2B01G377900.1 | Wheat | cytosol | 80.25 | 91.18 |
| HORVU4Hr1G084370.1 | Barley | cytosol | 18.39 | 77.59 |
| EER95529 | Sorghum | nucleus | 55.18 | 62.31 |
| HORVU4Hr1G086310.1 | Barley | cytosol | 20.71 | 61.79 |
| HORVU4Hr1G084330.1 | Barley | cytosol | 63.49 | 61.64 |
| OQU93258 | Sorghum | cytosol | 55.31 | 57.83 |
| Zm00001d027621_P001 | Maize | cytosol | 54.77 | 53.74 |
| HORVU1Hr1G092690.1 | Barley | cytosol | 39.78 | 52.24 |
| HORVU5Hr1G076190.1 | Barley | cytosol, peroxisome | 36.51 | 51.64 |
| HORVU1Hr1G038870.1 | Barley | plastid | 44.55 | 51.17 |
| HORVU6Hr1G057680.2 | Barley | cytosol, mitochondrion, nucleus | 38.42 | 39.61 |
| HORVU2Hr1G088110.4 | Barley | cytosol, mitochondrion | 36.51 | 38.29 |
| HORVU4Hr1G084340.1 | Barley | mitochondrion | 35.83 | 37.2 |
| HORVU4Hr1G084380.2 | Barley | cytosol | 28.2 | 36.77 |
| HORVU6Hr1G088580.4 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 36.65 | 36.25 |
| HORVU7Hr1G001030.5 | Barley | cytosol | 18.39 | 25.71 |
| HORVU4Hr1G001800.2 | Barley | cytosol | 15.94 | 25.38 |
| HORVU5Hr1G001270.2 | Barley | cytosol | 12.4 | 25.35 |
| HORVU5Hr1G070100.1 | Barley | cytosol | 17.3 | 24.19 |
| HORVU5Hr1G001450.1 | Barley | cytosol | 17.3 | 24.19 |
| HORVU0Hr1G036570.1 | Barley | mitochondrion | 11.44 | 21.99 |
| HORVU7Hr1G098290.1 | Barley | cytosol, peroxisome, plasma membrane | 17.44 | 17.78 |
| HORVU2Hr1G118990.1 | Barley | cytosol | 20.57 | 16.45 |
| HORVU0Hr1G022100.1 | Barley | cytosol | 8.72 | 8.9 |
Protein Annotations
| Gene3D:3.30.40.10 | Gene3D:3.40.50.410 | MapMan:35.1 | UniProt:A0A287DW07 | EnsemblPlantsGene:HORVU0Hr1G005150 | EnsemblPlants:HORVU0Hr1G005150.3 |
| InterPro:IPR001841 | InterPro:IPR002035 | InterPro:IPR013083 | InterPro:IPR036465 | PFAM:PF00092 | PFAM:PF14624 |
| PFAM:PF17123 | PFscan:PS50089 | PFscan:PS50234 | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF72 | SMART:SM00184 |
| SMART:SM00327 | SUPFAM:SSF53300 | SUPFAM:SSF57850 | UniParc:UPI000B468427 | InterPro:VWF_A | InterPro:Vwaint_dom |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | InterPro:vWFA_dom_sf | : | : |
Description
No Description!
Coordinates
chrchrUn:+:29053396..29055957
Molecular Weight (calculated)
79023.5 Da
IEP (calculated)
6.123
GRAVY (calculated)
-0.201
Length
734 amino acids
Sequence
(BLAST)
(BLAST)
001: RIEVTVRGNH LLLDSPPCSY PFPSSFFADE ASGSITILLP CSYQFSEQLL CGRSNWLNRY RACLFISFFE HLVTCREMEA TKQMNTCAIC LGGMGAGGGQ
101: AIFTAECSHT FHFHCITASI AHGNLLCPLC NAEWRELPFV RPPASSMPPT QSPPQPPAVD IVQPARRWRA RTPSVEPVVF DDDEQVRPPD SRRQAGAASD
201: EAVVVKTHGH YSTVARDSPD DNFAVLVHLK APGITGSGTE AAGDDPAQRA PVDLVTVLDV SSSMHGSKLA LLKQAMRFVI DILGPDDRLS VVSFSSRARR
301: VTRLTRMSDA GKALCVRAVE SLTARTGTNI AEGLRTAAKV LDERRHRNGV SCVVLLSDGQ DNYTPMRQAF GRGLPNYAAL LPPSFARTGT GAGDRATPVH
401: TFGFGNDHDA TAMHAVSEAT GGTFSFIENE AVIQDAFAQC VGGLLSVVVQ EARIAVQCLH PGVRVGSVKS GLYESLVDDD GRAASIVVGE LYADEERRFL
501: LFIVVPRAEE TDGDTTALIK VSCLYRDAAA GADVNVMAED TVVARPEHAV DAERSAEVER ERIRVEATED MAAARGAAER GEHQEAMEIL ENRRGAVAQS
601: DAARDGDPMI VALEMELRDM RRRVSNRQNY ARSGRAYMLA GMSAHLQQRG SSSQLQLPSV IAFQDGAVTT TAATHQVSQQ VATLPYATPA MLAMLLRSRK
701: AREASAASGQ RQPAAGAPEG AQGSEPTVPK ELNE
101: AIFTAECSHT FHFHCITASI AHGNLLCPLC NAEWRELPFV RPPASSMPPT QSPPQPPAVD IVQPARRWRA RTPSVEPVVF DDDEQVRPPD SRRQAGAASD
201: EAVVVKTHGH YSTVARDSPD DNFAVLVHLK APGITGSGTE AAGDDPAQRA PVDLVTVLDV SSSMHGSKLA LLKQAMRFVI DILGPDDRLS VVSFSSRARR
301: VTRLTRMSDA GKALCVRAVE SLTARTGTNI AEGLRTAAKV LDERRHRNGV SCVVLLSDGQ DNYTPMRQAF GRGLPNYAAL LPPSFARTGT GAGDRATPVH
401: TFGFGNDHDA TAMHAVSEAT GGTFSFIENE AVIQDAFAQC VGGLLSVVVQ EARIAVQCLH PGVRVGSVKS GLYESLVDDD GRAASIVVGE LYADEERRFL
501: LFIVVPRAEE TDGDTTALIK VSCLYRDAAA GADVNVMAED TVVARPEHAV DAERSAEVER ERIRVEATED MAAARGAAER GEHQEAMEIL ENRRGAVAQS
601: DAARDGDPMI VALEMELRDM RRRVSNRQNY ARSGRAYMLA GMSAHLQQRG SSSQLQLPSV IAFQDGAVTT TAATHQVSQQ VATLPYATPA MLAMLLRSRK
701: AREASAASGQ RQPAAGAPEG AQGSEPTVPK ELNE
001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
Arabidopsis Description
T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.