Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 2
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051773_P001 | Maize | plasma membrane | 39.05 | 39.22 |
| HORVU4Hr1G086310.1 | Barley | cytosol | 15.62 | 29.27 |
| HORVU4Hr1G084370.1 | Barley | cytosol | 10.85 | 28.74 |
| HORVU7Hr1G001030.5 | Barley | cytosol | 29.72 | 26.1 |
| HORVU5Hr1G001270.2 | Barley | cytosol | 19.31 | 24.79 |
| HORVU5Hr1G001450.1 | Barley | cytosol | 27.11 | 23.81 |
| HORVU5Hr1G070100.1 | Barley | cytosol | 27.11 | 23.81 |
| HORVU0Hr1G036570.1 | Barley | mitochondrion | 18.66 | 22.51 |
| HORVU5Hr1G076190.1 | Barley | cytosol, peroxisome | 24.08 | 21.39 |
| HORVU1Hr1G092690.1 | Barley | cytosol | 24.08 | 19.86 |
| HORVU1Hr1G038870.1 | Barley | plastid | 27.11 | 19.56 |
| HORVU2Hr1G088110.4 | Barley | cytosol, mitochondrion | 27.11 | 17.86 |
| HORVU7Hr1G098290.1 | Barley | cytosol, peroxisome, plasma membrane | 27.33 | 17.5 |
| HORVU6Hr1G057680.2 | Barley | cytosol, mitochondrion, nucleus | 26.68 | 17.28 |
| HORVU4Hr1G084340.1 | Barley | mitochondrion | 25.6 | 16.69 |
| HORVU0Hr1G005150.3 | Barley | cytosol, vacuole | 25.38 | 15.94 |
| HORVU4Hr1G084330.1 | Barley | cytosol | 26.03 | 15.87 |
| HORVU6Hr1G088580.4 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 25.38 | 15.77 |
| HORVU4Hr1G084380.2 | Barley | cytosol | 13.23 | 10.83 |
| HORVU2Hr1G118990.1 | Barley | cytosol | 21.48 | 10.78 |
| HORVU0Hr1G022100.1 | Barley | cytosol | 12.36 | 7.93 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G001800.2 | EnsemblPlantsGene:HORVU4Hr1G001800 | Gene3D:3.40.50.410 | InterPro:IPR002035 | InterPro:IPR036465 | InterPro:VWF_A |
| InterPro:Vwaint_dom | InterPro:vWFA_dom_sf | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF64 | PFAM:PF00092 | PFAM:PF14624 |
| PFscan:PS50234 | SMART:SM00327 | SUPFAM:SSF53300 | UniParc:UPI000296554C | UniProt:M0VCY2 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr4H:-:2897344..2899502
Molecular Weight (calculated)
51353.6 Da
IEP (calculated)
9.532
GRAVY (calculated)
-0.554
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKAVEIKAY RNEAAPLKAH EQTLMVKVTA PATGKKETAA LDIVFVLDIS GSMAGDRIAK MKKTMEFFVK EKMGAEDRLA IVPFSSDAND KSHAKLDRMN
101: DDKKKKAVVA FINGLKAHGD TNIAAGLESA VKMLVEGRRP DRACVIFLLT DGAQNHGDAR KVKDVSKVNV QTYGFGEKHD PTLLYELAHK SHGGAFHLVK
201: DNSAENNLAD GFGMVLGRFR DISVLNVRVT LRVTPKQKEP EKIHDVDPGS YPTEHDKEKG SFTVEFGDLA RLEARRTMLL LHLPKVHKEE KGKTVLTVEC
301: LYRLAGAAKD TKVGPQEVKM DRSSKANTDE TKPEVELELF RRKHAAAVDE ATKLAEKKNF AGAREKLAER LSALDDLDNP KSEDLVGFLT TQMEHMFDHM
401: GSQEEYDKKG KALALSILSS HARQRPTVQG HVHDDSLFYL KRDSKYVAQA RQFHINPNTR F
101: DDKKKKAVVA FINGLKAHGD TNIAAGLESA VKMLVEGRRP DRACVIFLLT DGAQNHGDAR KVKDVSKVNV QTYGFGEKHD PTLLYELAHK SHGGAFHLVK
201: DNSAENNLAD GFGMVLGRFR DISVLNVRVT LRVTPKQKEP EKIHDVDPGS YPTEHDKEKG SFTVEFGDLA RLEARRTMLL LHLPKVHKEE KGKTVLTVEC
301: LYRLAGAAKD TKVGPQEVKM DRSSKANTDE TKPEVELELF RRKHAAAVDE ATKLAEKKNF AGAREKLAER LSALDDLDNP KSEDLVGFLT TQMEHMFDHM
401: GSQEEYDKKG KALALSILSS HARQRPTVQG HVHDDSLFYL KRDSKYVAQA RQFHINPNTR F
001: MGSKWRKAKV ALGLNLCLYV PKTLEDSSPP RRSDDAVSLS PVIVQRPSTP TPSSSGLRLP RSMSKSSSKK TCAICLTAMK AGQGHAIFTA ECSHSFHFQC
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR
Arabidopsis Description
Retroelement pol polyprotein-like [Source:UniProtKB/TrEMBL;Acc:Q9FF49]
SUBAcon: [mitochondrion,plastid,extracellular]
SUBAcon: [mitochondrion,plastid,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.