Factsheet for HORVU1Hr1G038870.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
peroxisome 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	peroxisome
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G164800.1	Wheat	cytosol, nucleus, peroxisome	95.46	95.91
TraesCS1D01G144900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome, plastid	94.68	88.58
HORVU4Hr1G084370.1	Barley	cytosol	18.62	68.39
HORVU4Hr1G086310.1	Barley	cytosol	24.88	64.63
EER91508	Sorghum	cytosol, plastid	64.48	63.68
Zm00001d032753_P001	Maize	cytosol	62.6	62.31
HORVU1Hr1G092690.1	Barley	cytosol	49.14	56.17
HORVU5Hr1G076190.1	Barley	cytosol, peroxisome	44.13	54.34
HORVU4Hr1G084330.1	Barley	cytosol	52.9	44.71
HORVU0Hr1G005150.3	Barley	cytosol, vacuole	51.17	44.55
HORVU6Hr1G057680.2	Barley	cytosol, mitochondrion, nucleus	42.72	38.34
HORVU2Hr1G088110.4	Barley	cytosol, mitochondrion	41.78	38.14
HORVU4Hr1G084340.1	Barley	mitochondrion	41.0	37.06
HORVU6Hr1G088580.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	38.81	33.42
HORVU4Hr1G084380.2	Barley	cytosol	25.35	28.77
HORVU4Hr1G001800.2	Barley	cytosol	19.56	27.11
HORVU5Hr1G001270.2	Barley	cytosol	15.02	26.74
HORVU7Hr1G001030.5	Barley	cytosol	20.66	25.14
HORVU5Hr1G070100.1	Barley	cytosol	20.5	24.95
HORVU5Hr1G001450.1	Barley	cytosol	20.5	24.95
HORVU0Hr1G036570.1	Barley	mitochondrion	13.46	22.51
HORVU7Hr1G098290.1	Barley	cytosol, peroxisome, plasma membrane	20.34	18.06
HORVU2Hr1G118990.1	Barley	cytosol	22.22	15.47
HORVU0Hr1G022100.1	Barley	cytosol	10.17	9.04

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	UniProt:A0A287F716	EnsemblPlantsGene:HORVU1Hr1G038870	EnsemblPlants:HORVU1Hr1G038870.1
InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083	InterPro:IPR036465	PFAM:PF00092	PFAM:PF13639
PFAM:PF14624	PFscan:PS50089	PFscan:PS50234	PANTHER:PTHR10579	PANTHER:PTHR10579:SF72	SMART:SM00184
SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	UniParc:UPI000B47DB20	InterPro:VWF_A	InterPro:Vwaint_dom
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	InterPro:vWFA_dom_sf	:	:

Description

No Description!

Coordinates

chrchr1H:-:270792753..270795327

Molecular Weight (calculated)

68322.3 Da

IEP (calculated)

8.842

GRAVY (calculated)

-0.381

Length

639 amino acids

Sequence
(BLAST)

001: MESNSSTCGI CNGDMRRGGG ASASGFTADC SHQFHYRCVS GSLASSRQAC PLCSARCRDL PSFRSSKSKS STPSQPPHAS RAPAQPFFRP MEPRVFDDDD
101: PVVRAPRPLG DRHHGAASAT SSGSLAVALS THCEYSSLAR DAPHENFAVL VHARAPGTGG TATGGTPPRA RAPIDLVTVL DVSGSMVGSK LALLKQAMGF
201: VVDSLGPADR LCVVSFSSGA SRLMRLARMS ESDGGKDLAK RAVQSLAASG GTNIGAALRK AAKVLDDRLH RNAVASVILL SDGQDTYTVP KRGRDANYDA
301: LVPPSFMYTG AGDRSAPVHT FGFGTDHDAA AMHTIAEATG GTFSFIENET DIQDAFAQCI GGLLSVAVQE LRVDISCPQS GVRVRSVNSG CYKSHVDVDG
401: RSASIDVGEL YADEERRFLL LMDVPRARST TDVTRLMQVS CAYRDMVTGR PTNVDGEDAV VQRPSRAVSQ ERSAEVERER VRLAATDGIA AARAAAERGA
501: HEEAAEILQS RQRAVARSAA ARAGDSMCVE LSRDLQEMRA RVADRRRYEL SGRAYMLAGL SSHAQQRATS RQMSGDSETT RRRAEAALGT TVISTTGATA
601: SYSYVTPAMM DMLDRSRRSR EMTALSQQRS KERRRSAHY

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.