Factsheet for HORVU4Hr1G084340.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G339200.1	Wheat	mitochondrion	93.07	93.07
TraesCS5A01G512800.2	Wheat	mitochondrion	92.93	92.93
TraesCS4B01G344100.1	Wheat	mitochondrion	92.64	92.64
OQU93256	Sorghum	mitochondrion	75.67	76.65
Zm00001d027622_P001	Maize	mitochondrion	73.83	75.43
Os03t0142500-01	Rice	plasma membrane	72.42	73.78
HORVU4Hr1G086310.1	Barley	cytosol	18.53	53.25
GSMUA_Achr5P20480_001	Banana	mitochondrion	47.52	53.0
GSMUA_Achr11P...	Banana	mitochondrion	46.82	52.96
HORVU4Hr1G084370.1	Barley	cytosol	12.87	52.3
GSMUA_Achr1P03470_001	Banana	mitochondrion, plastid	46.11	50.94
VIT_13s0019g04440.t01	Wine grape	endoplasmic reticulum	50.49	50.28
HORVU2Hr1G088110.4	Barley	cytosol, mitochondrion	49.08	49.57
VIT_06s0004g02630.t01	Wine grape	mitochondrion, nucleus	50.64	49.11
HORVU6Hr1G057680.2	Barley	cytosol, mitochondrion, nucleus	49.36	49.02
CDY31517	Canola	extracellular, mitochondrion, plastid	41.16	48.66
CDY72156	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	37.06	48.61
CDY52708	Canola	extracellular, mitochondrion, plastid	41.16	48.34
GSMUA_Achr11P...	Banana	mitochondrion	36.49	47.96
CDY67781	Canola	cytosol	35.78	47.83
Bra020234.1-P	Field mustard	mitochondrion	46.39	47.19
CDY32819	Canola	cytosol	40.31	47.19
AT5G60710.1	Thale cress	extracellular, mitochondrion, plastid	46.82	47.02
Solyc05g056140.2.1	Tomato	nucleus	48.37	46.98
PGSC0003DMT400059986	Potato	nucleus	48.23	46.91
Bra005066.1-P	Field mustard	mitochondrion	43.14	46.49
Bra030712.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	40.17	46.48
Bra002456.1-P	Field mustard	mitochondrion, plastid	45.54	46.0
PGSC0003DMT400020896	Potato	mitochondrion, plastid	47.52	45.84
Solyc11g069600.1.1	Tomato	plastid	47.38	45.7
CDX74871	Canola	mitochondrion	39.32	45.57
HORVU6Hr1G088580.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	47.67	45.42
AT2G38970.1	Thale cress	mitochondrion	44.41	45.38
CDX91506	Canola	mitochondrion	38.76	45.07
AT1G08050.1	Thale cress	plastid	40.74	44.93
AT3G54780.4	Thale cress	endoplasmic reticulum, extracellular, plastid	41.3	42.82
GSMUA_Achr2P11780_001	Banana	golgi	28.15	42.16
HORVU1Hr1G092690.1	Barley	cytosol	33.24	42.04
CDX93597	Canola	cytosol	38.05	41.84
CDX95099	Canola	cytosol	33.24	41.81
HORVU5Hr1G076190.1	Barley	cytosol, peroxisome	30.69	41.81
HORVU1Hr1G038870.1	Barley	plastid	37.06	41.0
HORVU4Hr1G084330.1	Barley	cytosol	40.03	37.43
HORVU0Hr1G005150.3	Barley	cytosol, vacuole	37.2	35.83
HORVU5Hr1G001270.2	Barley	cytosol	14.85	29.25
HORVU4Hr1G084380.2	Barley	cytosol	21.78	27.35
HORVU5Hr1G070100.1	Barley	cytosol	20.08	27.05
HORVU5Hr1G001450.1	Barley	cytosol	20.08	27.05
HORVU7Hr1G001030.5	Barley	cytosol	19.52	26.29
HORVU4Hr1G001800.2	Barley	cytosol	16.69	25.6
HORVU0Hr1G036570.1	Barley	mitochondrion	13.58	25.13
Bra018663.1-P	Field mustard	nucleus	37.62	20.17
HORVU7Hr1G098290.1	Barley	cytosol, peroxisome, plasma membrane	17.96	17.64
HORVU2Hr1G118990.1	Barley	cytosol	20.08	15.47
HORVU0Hr1G022100.1	Barley	cytosol	9.19	9.04

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	EnsemblPlantsGene:HORVU4Hr1G084340	EnsemblPlants:HORVU4Hr1G084340.1	InterPro:IPR001841
InterPro:IPR002035	InterPro:IPR013083	InterPro:IPR036465	UniProt:M0ZFM1	PFAM:PF00092	PFAM:PF14624
PFAM:PF17123	PFscan:PS50089	PFscan:PS50234	PANTHER:PTHR10579	PANTHER:PTHR10579:SF54	SMART:SM00184
SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	UniParc:UPI0002963538	InterPro:VWF_A	InterPro:Vwaint_dom
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	InterPro:vWFA_dom_sf	:	:

Description

No Description!

Coordinates

chrchr4H:+:628364627..628370545

Molecular Weight (calculated)

76778.0 Da

IEP (calculated)

6.576

GRAVY (calculated)

-0.278

Length

707 amino acids

Sequence
(BLAST)

001: MAAAWDWAKR ALATKLCIRV PDRQRAIEDA PQPPPPPHPP SASAVEAGPV TGEEEEKARS PSVSSRRLSS SGSRSSKRVC AICLGSMRTG HGQALFTAEC
101: SHKFHFHCIT SNVRHGNRIC PICRADWKEL PFQVTQLADG THGRARVSPV NWPQDDGHMA VIRRLSNSYS GNLLEQLPVF RTPEADIFND DEHIDVHSET
201: AEENNEVTGS VEIKTYAEVQ AIQQSVTQKV FSILIHLKAP KSLESVSSRA PLDLVTVLDV SGSMKGAKLA LLKKAMCFVI QTLGPNDRLS VIAFSSTARR
301: LFPLRQMNVN GRMQAIQAVN SLVDGGGTNI SDGLKKGAKV IEHRRLKNPV CSIILLSDGQ DTYSVPTFDD ELQTNHSALV PPSILPGTGN HVQIHTFGFG
401: MDHDSAAMHA IAETSSGTFS FIDAEGSIQN GFAQCIGGLL SVVVKEMRLD IGCVDDGVLL TSIKSGGYAS EVAVDGRNGS VDIGDLYADE ERGFLITLHV
501: PAAQGQQTVL IKPSCTYQDA VTTEIIQVHG EEVGVERPAH YVDCKMSPEV ARESHRVQAM EDMSAARAAA DGGDFAQAVS ILEGRTRILE SQAAQSEDSQ
601: CLALITELRE MQERVESRRR YDESGRAFML AGLSSHSWQR ATARGDSTEL NTQIHTYQTP SMVDMLHRSQ ALVPALVEML NRSPTVAPSR GSGRSVRSTK
701: SFSERLA

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.