Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G284200.1 | Wheat | cytosol | 85.36 | 88.42 |
| TraesCS5A01G359200.1 | Wheat | cytosol, peroxisome, plastid | 88.82 | 87.98 |
| TraesCS5A01G284900.1 | Wheat | cytosol, mitochondrion, plastid | 43.16 | 77.78 |
| Zm00001d008553_P001 | Maize | cytosol | 65.51 | 68.14 |
| Zm00001d007190_P001 | Maize | cytosol | 65.7 | 68.06 |
| TraesCS2D01G459400.1 | Wheat | mitochondrion | 67.63 | 66.98 |
| OQU79988 | Sorghum | cytosol | 69.75 | 66.91 |
| OQU90497 | Sorghum | cytosol | 66.09 | 66.6 |
| HORVU4Hr1G084370.1 | Barley | cytosol | 20.62 | 61.49 |
| HORVU4Hr1G086310.1 | Barley | cytosol | 28.71 | 60.57 |
| HORVU1Hr1G092690.1 | Barley | cytosol | 54.34 | 50.45 |
| HORVU1Hr1G038870.1 | Barley | plastid | 54.34 | 44.13 |
| HORVU0Hr1G005150.3 | Barley | cytosol, vacuole | 51.64 | 36.51 |
| HORVU4Hr1G084330.1 | Barley | cytosol | 53.18 | 36.51 |
| Os10t0464800-00 | Rice | nucleus | 57.23 | 31.3 |
| HORVU6Hr1G057680.2 | Barley | cytosol, mitochondrion, nucleus | 42.58 | 31.04 |
| HORVU4Hr1G084340.1 | Barley | mitochondrion | 41.81 | 30.69 |
| HORVU2Hr1G088110.4 | Barley | cytosol, mitochondrion | 40.27 | 29.86 |
| HORVU6Hr1G088580.4 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 41.04 | 28.71 |
| HORVU5Hr1G001270.2 | Barley | cytosol | 18.3 | 26.46 |
| HORVU7Hr1G001030.5 | Barley | cytosol | 25.43 | 25.14 |
| HORVU5Hr1G001450.1 | Barley | cytosol | 24.86 | 24.57 |
| HORVU5Hr1G070100.1 | Barley | cytosol | 24.86 | 24.57 |
| HORVU4Hr1G084380.2 | Barley | cytosol | 26.59 | 24.51 |
| HORVU4Hr1G001800.2 | Barley | cytosol | 21.39 | 24.08 |
| HORVU0Hr1G036570.1 | Barley | mitochondrion | 17.15 | 23.3 |
| HORVU7Hr1G098290.1 | Barley | cytosol, peroxisome, plasma membrane | 24.86 | 17.92 |
| HORVU2Hr1G118990.1 | Barley | cytosol | 24.47 | 13.83 |
| HORVU0Hr1G022100.1 | Barley | cytosol | 13.1 | 9.46 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G076190.1 | EnsemblPlantsGene:HORVU5Hr1G076190 | Gene3D:3.40.50.410 | InterPro:IPR002035 | InterPro:IPR036465 | InterPro:VWF_A |
| InterPro:Vwaint_dom | InterPro:vWFA_dom_sf | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF72 | PFAM:PF13768 | PFAM:PF14624 |
| PFscan:PS50234 | SEG:seg | SMART:SM00327 | SUPFAM:SSF53300 | UniParc:UPI000B46A86F | UniProt:A0A287RUW2 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:549574945..549576576
Molecular Weight (calculated)
55452.2 Da
IEP (calculated)
8.615
GRAVY (calculated)
-0.226
Length
519 amino acids
Sequence
(BLAST)
(BLAST)
001: LAGLSTPFPA PAPAAAYYYQ DDEPVEHKKP LANSGRGLVL KTHCEFPAIG RGASRDKFAV LVHARAPADV PRAPLDLVTV LDVSGSMKGE KLALLKRAMA
101: FVIDQLGPAD RLSVVSFSTQ AARLTRLARM SDAGKASAKL AVERLVDVGA TNIREGLRVG AQVLVGRRHK NSVASMILLS DGQDSYLGSK RYMDLVPPLF
201: VLAGSRPGPI HTFGFGTTHD AAALHTIAQA TGGTFSFVGN QAAIQDSFAQ CIGGLLSVAV QEARIAVTCL HRGVHVQEVK SGCYGNHVDA DGRAASIDVG
301: ELYDDEERRF LVLAYVPRAR PAESVTRLVK VTCAYQDAAT GQAANAAAPA AVIQRPLELT DLPPACMEVE RERVRLAATQ DIAAAREAAE GGQHAGAAKI
401: LDSRLKAVER SAPGMAGDDP TCEAIKEELR DLSARVGDRR EYQRTGRACL LAGMSSHAQQ RASAVELQSS AASKPRAYLT PKMEEMVETS REQSRKRRNS
501: CGSTQQLNNK QIKQDLTDD
101: FVIDQLGPAD RLSVVSFSTQ AARLTRLARM SDAGKASAKL AVERLVDVGA TNIREGLRVG AQVLVGRRHK NSVASMILLS DGQDSYLGSK RYMDLVPPLF
201: VLAGSRPGPI HTFGFGTTHD AAALHTIAQA TGGTFSFVGN QAAIQDSFAQ CIGGLLSVAV QEARIAVTCL HRGVHVQEVK SGCYGNHVDA DGRAASIDVG
301: ELYDDEERRF LVLAYVPRAR PAESVTRLVK VTCAYQDAAT GQAANAAAPA AVIQRPLELT DLPPACMEVE RERVRLAATQ DIAAAREAAE GGQHAGAAKI
401: LDSRLKAVER SAPGMAGDDP TCEAIKEELR DLSARVGDRR EYQRTGRACL LAGMSSHAQQ RASAVELQSS AASKPRAYLT PKMEEMVETS REQSRKRRNS
501: CGSTQQLNNK QIKQDLTDD
001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
Arabidopsis Description
T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.