Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G076190.1 | Barley | cytosol, peroxisome | 88.42 | 85.36 |
| TraesCS5A01G284900.1 | Wheat | cytosol, mitochondrion, plastid | 41.52 | 72.22 |
| TraesCS2B01G515000.1 | Wheat | cytosol | 69.86 | 66.29 |
| Zm00001d007190_P001 | Maize | cytosol | 66.07 | 66.07 |
| Zm00001d008553_P001 | Maize | cytosol | 65.47 | 65.73 |
| OQU79988 | Sorghum | cytosol | 70.26 | 65.06 |
| OQU90497 | Sorghum | cytosol | 64.87 | 63.11 |
| TraesCS3B01G425600.1 | Wheat | cytosol | 38.92 | 47.45 |
| TraesCS1B01G456800.1 | Wheat | cytosol | 56.69 | 47.1 |
| TraesCS5B01G338500.1 | Wheat | cytosol | 44.51 | 43.55 |
| TraesCS1B01G164800.1 | Wheat | cytosol, nucleus, peroxisome | 53.69 | 42.3 |
| TraesCS2B01G377900.1 | Wheat | cytosol | 51.9 | 40.25 |
| TraesCS4B01G358100.1 | Wheat | plastid | 53.49 | 37.64 |
| TraesCS4B01G344200.1 | Wheat | cytosol | 52.49 | 36.48 |
| TraesCS6B01G254400.1 | Wheat | mitochondrion | 43.91 | 30.99 |
| TraesCS4B01G344100.1 | Wheat | mitochondrion | 43.11 | 30.55 |
| TraesCS2B01G382300.1 | Wheat | mitochondrion | 42.12 | 30.36 |
| Os10t0464800-00 | Rice | nucleus | 57.29 | 30.24 |
| TraesCS6B01G413100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 41.92 | 28.42 |
| TraesCS5B01G009400.1 | Wheat | cytosol | 25.15 | 26.36 |
| TraesCS5B01G009600.1 | Wheat | cytosol | 25.15 | 24.0 |
| TraesCS3B01G577600.1 | Wheat | cytosol | 24.75 | 23.66 |
| TraesCS2B01G026900.1 | Wheat | cytosol | 22.75 | 19.03 |
| TraesCS2B01G057300.1 | Wheat | peroxisome | 26.95 | 17.53 |
| TraesCS7B01G344600.1 | Wheat | mitochondrion | 11.98 | 17.09 |
| TraesCS7B01G327100.1 | Wheat | cytosol, peroxisome, plasma membrane | 23.55 | 16.21 |
| TraesCS6B01G057500.1 | Wheat | cytosol | 16.17 | 16.07 |
| TraesCS5B01G176000.2 | Wheat | mitochondrion | 16.57 | 15.75 |
| TraesCS5B01G009700.1 | Wheat | mitochondrion | 24.35 | 14.2 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G284200.1 | EnsemblPlantsGene:TraesCS5B01G284200 | Gene3D:3.40.50.410 | InterPro:IPR002035 | InterPro:IPR036465 | InterPro:VWF_A |
| InterPro:Vwaint_dom | InterPro:vWFA_dom_sf | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF51 | PFAM:PF13768 | PFAM:PF14624 |
| PFscan:PS50234 | SEG:seg | SMART:SM00327 | SUPFAM:SSF53300 | TIGR:cd01466 | MapMan:35.1 |
Description
No Description!
Coordinates
chr5B:-:469980640..469982757
Molecular Weight (calculated)
53392.5 Da
IEP (calculated)
7.902
GRAVY (calculated)
-0.264
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHNIFPWLA VPPPAPAPAP VAAYYQDDEP VEDKKPLANN GRGLVLKTHC EFPAIGRGTS RDKFAVLVHA KAPADVARAP LDLVTVLDVS GSMNGEKLAL
101: LKQAMGFVID QLGPADRLSV VFFSDRAGRL TRLARMSGAG KASAKLAVES LVALAGTNIR EGLHVGAQVL VGRRHKNSVA SMILLSDGQD SYVRGNYMDL
201: VPPSFKDAGS RPGPIHTFGF GATHDAAALH TVAEATGGTF SFVGNQAAIQ NSFAQCIGGL LSEVKSGCYS NHVDADGRAA SIDVGELYDD EERRFLVLVY
301: VPRARPTESV TRLVKVTCAY KDAATGQAAN AAAPAAVIQR PLELTDLPPP CMEVERERVR LAATQDIAAA RDAAEGGQHA GAARILDSRL KAVERSAPGM
401: AGDDPTCEAI KEELRDLSAR VGDRREYQQT GRATLLAGMS SHSQQRASAV ELQSASKPRA YLTPKMEEMV ETSREQSRKR GNSSGSTQQL NKHIKQDLID
501: G
101: LKQAMGFVID QLGPADRLSV VFFSDRAGRL TRLARMSGAG KASAKLAVES LVALAGTNIR EGLHVGAQVL VGRRHKNSVA SMILLSDGQD SYVRGNYMDL
201: VPPSFKDAGS RPGPIHTFGF GATHDAAALH TVAEATGGTF SFVGNQAAIQ NSFAQCIGGL LSEVKSGCYS NHVDADGRAA SIDVGELYDD EERRFLVLVY
301: VPRARPTESV TRLVKVTCAY KDAATGQAAN AAAPAAVIQR PLELTDLPPP CMEVERERVR LAATQDIAAA RDAAEGGQHA GAARILDSRL KAVERSAPGM
401: AGDDPTCEAI KEELRDLSAR VGDRREYQQT GRATLLAGMS SHSQQRASAV ELQSASKPRA YLTPKMEEMV ETSREQSRKR GNSSGSTQQL NKHIKQDLID
501: G
001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
Arabidopsis Description
T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.