Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G284200.1 | Wheat | cytosol | 66.29 | 69.86 |
| Zm00001d008553_P001 | Maize | cytosol | 61.93 | 65.53 |
| Zm00001d007190_P001 | Maize | cytosol | 61.17 | 64.47 |
| OQU90497 | Sorghum | cytosol | 61.17 | 62.72 |
| OQU79988 | Sorghum | cytosol | 63.45 | 61.92 |
| TraesCS1B01G456800.1 | Wheat | cytosol | 54.17 | 47.43 |
| TraesCS3B01G425600.1 | Wheat | cytosol | 36.17 | 46.47 |
| TraesCS5B01G338500.1 | Wheat | cytosol | 41.1 | 42.38 |
| TraesCS1B01G164800.1 | Wheat | cytosol, nucleus, peroxisome | 49.24 | 40.88 |
| TraesCS2B01G377900.1 | Wheat | cytosol | 47.54 | 38.85 |
| TraesCS4B01G358100.1 | Wheat | plastid | 49.62 | 36.8 |
| TraesCS4B01G344200.1 | Wheat | cytosol | 49.81 | 36.48 |
| TraesCS4B01G344100.1 | Wheat | mitochondrion | 39.02 | 29.14 |
| TraesCS6B01G254400.1 | Wheat | mitochondrion | 38.45 | 28.59 |
| TraesCS2B01G382300.1 | Wheat | mitochondrion | 37.5 | 28.49 |
| TraesCS6B01G413100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 39.58 | 28.28 |
| Os10t0464800-00 | Rice | nucleus | 50.57 | 28.13 |
| TraesCS5B01G009400.1 | Wheat | cytosol | 23.11 | 25.52 |
| TraesCS3B01G577600.1 | Wheat | cytosol | 24.62 | 24.81 |
| TraesCS5B01G009600.1 | Wheat | cytosol | 23.67 | 23.81 |
| TraesCS2B01G026900.1 | Wheat | cytosol | 22.35 | 19.7 |
| TraesCS7B01G344600.1 | Wheat | mitochondrion | 12.12 | 18.23 |
| TraesCS6B01G057500.1 | Wheat | cytosol | 16.48 | 17.26 |
| TraesCS2B01G057300.1 | Wheat | peroxisome | 24.24 | 16.62 |
| TraesCS7B01G327100.1 | Wheat | cytosol, peroxisome, plasma membrane | 22.92 | 16.62 |
| TraesCS5B01G009700.1 | Wheat | mitochondrion | 24.62 | 15.13 |
| TraesCS5B01G176000.2 | Wheat | mitochondrion | 14.58 | 14.61 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G515000.1 | EnsemblPlantsGene:TraesCS2B01G515000 | Gene3D:3.40.50.410 | InterPro:IPR002035 | InterPro:IPR036465 | InterPro:VWF_A |
| InterPro:Vwaint_dom | InterPro:vWFA_dom_sf | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF51 | PFAM:PF00092 | PFAM:PF14624 |
| PFscan:PS50234 | SEG:seg | SMART:SM00327 | SUPFAM:SSF53300 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2B:+:709991901..709993517
Molecular Weight (calculated)
56568.5 Da
IEP (calculated)
9.680
GRAVY (calculated)
-0.088
Length
528 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNTKVLHRA PPPPTPYAQV AVYQDAEPLK HRAEGAPAAP TNGSLVLKTH CELPTLGRGA SRDKFAVLVH ARAPADVARA PLDLVTVLDV SGSMEGQKLA
101: LLKQAMGFVI DQLGPDDRLS MVSFSGEATR LIPLTRMTVA GKGSAKLAVE GIVVRWTGTN IGEGLRMGAQ VLAGRRHKSV VASMILLSDG IIKNGGAKDY
201: MTLVPPLFRH AGTRPGPIHT FGLGTYIDAV AMHSIAEAAG GTFSFIENQA GIKESFAQCI GGLLSVAVQE VRISVTCLHR GVRVLELKSG CYGNHVGADG
301: RAASVDVGEL YDGEDRRFLV LMHVPRVRPT ESVTRLVKVS CTYKDAATAQ VAHVAAPAAV IKRLLELELT EIPAPSIEVE RERVRLAATQ DMAAAQVAAE
401: WAEYACAVRI LDSRLKAVEK SAPGAAGDPT CEVLKEELRD LTARVRGPLE YLRTGRACLL AGMSSHAQQR ASASTSSKAR AYLTPKMEEM VKVSREQSRK
501: RGSSQLPWSQ LKQIKQDPSE NFGSRIAQ
101: LLKQAMGFVI DQLGPDDRLS MVSFSGEATR LIPLTRMTVA GKGSAKLAVE GIVVRWTGTN IGEGLRMGAQ VLAGRRHKSV VASMILLSDG IIKNGGAKDY
201: MTLVPPLFRH AGTRPGPIHT FGLGTYIDAV AMHSIAEAAG GTFSFIENQA GIKESFAQCI GGLLSVAVQE VRISVTCLHR GVRVLELKSG CYGNHVGADG
301: RAASVDVGEL YDGEDRRFLV LMHVPRVRPT ESVTRLVKVS CTYKDAATAQ VAHVAAPAAV IKRLLELELT EIPAPSIEVE RERVRLAATQ DMAAAQVAAE
401: WAEYACAVRI LDSRLKAVEK SAPGAAGDPT CEVLKEELRD LTARVRGPLE YLRTGRACLL AGMSSHAQQR ASASTSSKAR AYLTPKMEEM VKVSREQSRK
501: RGSSQLPWSQ LKQIKQDPSE NFGSRIAQ
001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
Arabidopsis Description
T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.