Factsheet for TraesCS6B01G057500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11757	Sorghum	cytosol	30.16	29.29
Zm00001d024886_P002	Maize	cytosol	29.76	29.07
Zm00001d024014_P001	Maize	cytosol	28.77	28.83
TraesCS5B01G009400.1	Wheat	cytosol	19.84	20.92
TraesCS5B01G009600.1	Wheat	cytosol	21.63	20.76
TraesCS2B01G026900.1	Wheat	cytosol	24.21	20.37
TraesCS3B01G577600.1	Wheat	cytosol	21.03	20.23
EES05180	Sorghum	mitochondrion	12.3	16.8
TraesCS2B01G515000.1	Wheat	cytosol	17.26	16.48
TraesCS5B01G284200.1	Wheat	cytosol	16.07	16.17
TraesCS7B01G327100.1	Wheat	cytosol, peroxisome, plasma membrane	22.02	15.25
TraesCS5B01G338500.1	Wheat	cytosol	15.28	15.04
TraesCS1B01G164800.1	Wheat	cytosol, nucleus, peroxisome	18.45	14.62
TraesCS1B01G456800.1	Wheat	cytosol	17.46	14.59
TraesCS4B01G344100.1	Wheat	mitochondrion	19.64	14.0
TraesCS2B01G377900.1	Wheat	cytosol	17.66	13.78
TraesCS6B01G254400.1	Wheat	mitochondrion	19.25	13.66
TraesCS4B01G358100.1	Wheat	plastid	19.25	13.62
TraesCS2B01G382300.1	Wheat	mitochondrion	18.45	13.38
TraesCS4B01G344200.1	Wheat	cytosol	18.85	13.18
TraesCS6B01G413100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	18.45	12.58
TraesCS5B01G176000.2	Wheat	mitochondrion	12.9	12.33
TraesCS3B01G425600.1	Wheat	cytosol	9.72	11.92
KXG38506	Sorghum	cytosol	7.74	11.54
TraesCS2B01G057300.1	Wheat	peroxisome	15.48	10.13
TraesCS5B01G009700.1	Wheat	mitochondrion	15.08	8.85
TraesCS7B01G344600.1	Wheat	mitochondrion	4.17	5.98

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.46	Gene3D:3.40.50.410	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR002035	InterPro:IPR036465	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF00092	PIRSF:PIRSF000654
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50234	PANTHER:PTHR10579	PANTHER:PTHR10579:SF64	InterPro:Prot_kinase_dom
SMART:SM00220	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6B01G057500
EnsemblPlants:TraesCS6B01G057500.1	InterPro:VWF_A	SEG:seg	InterPro:vWFA_dom_sf	:	:

Description

No Description!

Coordinates

chr6B:-:37965438..37974196

Molecular Weight (calculated)

55850.5 Da

IEP (calculated)

5.898

GRAVY (calculated)

-0.161

Length

504 amino acids

Sequence
(BLAST)

001: MGVQHENIVR LLGYCYETRN KIAEYNGKLV FAGYDERLLC LEYLQSGSLE DHISDEPCRL DWSISYVIIR GICEGLKYLH TGSEHPIYHL DLKPANILLD
101: GDKIPKIGDF SLSRLLVSTQ TCVTKTFIGT PGYMPPEYID RQEITPKFDV FSLGVIIQKI MAGQKLHCQY AHTPPEKFID LVCENWEKRL QATMSTDISL
201: EIKTCIETPL KCVESDRKKR PTITQIVDEL DKIDNAKSSP IGQVTGVRKK RDFNKLYASL DSTIGFNDDE PIIIAPPNSV QLVIKNSKEA PLKENNQKVM
301: LELTGGDSSV DRPGLDLVVV LDVSGSMSGE KIDEMKVAMQ FVVRKLCPID RLSIVTFSND ATRLCPLRQI TRDSQRDLQK IVNGLIARGG TNISAGLQTG
401: LKVLTDRKVS DGRVVGVMLM SDGHESSGDA RQAPVGNVPV YTFGFGKDSD SLLLREVTAK SIGGTFSFAR DMDGLTMAFS HCLAGLLTVA AEELYLTVSC
501: VRDE

Best Arabidopsis Sequence Match ( AT5G60710.1 )
(BLAST)

001: MGSKWRKAKV ALGLNLCLYV PKTLEDSSPP RRSDDAVSLS PVIVQRPSTP TPSSSGLRLP RSMSKSSSKK TCAICLTAMK AGQGHAIFTA ECSHSFHFQC
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR

Arabidopsis Description

Retroelement pol polyprotein-like [Source:UniProtKB/TrEMBL;Acc:Q9FF49]
SUBAcon: [mitochondrion,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.