Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05180 | Sorghum | mitochondrion | 65.32 | 91.87 |
| Zm00001d024886_P002 | Maize | cytosol | 88.44 | 88.95 |
| KXG38506 | Sorghum | cytosol | 57.8 | 88.76 |
| Zm00001d024014_P001 | Maize | cytosol | 83.43 | 86.08 |
| TraesCS2B01G026900.1 | Wheat | cytosol | 46.05 | 39.9 |
| KXG20893 | Sorghum | cytosol, plastid | 42.58 | 36.17 |
| TraesCS6B01G057500.1 | Wheat | cytosol | 29.29 | 30.16 |
| OQU90497 | Sorghum | cytosol | 26.78 | 26.99 |
| OQU79988 | Sorghum | cytosol | 27.55 | 26.43 |
| EER91509 | Sorghum | nucleus | 26.4 | 23.46 |
| EER91508 | Sorghum | cytosol, plastid | 27.75 | 22.26 |
| EER95529 | Sorghum | nucleus | 27.55 | 22.0 |
| OQU91675 | Sorghum | cytosol | 26.2 | 21.86 |
| OQU85324 | Sorghum | mitochondrion | 28.9 | 21.34 |
| OQU81931 | Sorghum | mitochondrion | 28.32 | 21.09 |
| OQU93256 | Sorghum | mitochondrion | 27.94 | 20.77 |
| EER91513 | Sorghum | mitochondrion | 26.98 | 19.89 |
| OQU93258 | Sorghum | cytosol | 26.78 | 19.8 |
| OQU85917 | Sorghum | nucleus | 27.75 | 19.54 |
| EER87790 | Sorghum | endoplasmic reticulum, extracellular | 23.51 | 19.18 |
| KXG25767 | Sorghum | mitochondrion | 16.38 | 18.16 |
| OQU75754 | Sorghum | mitochondrion, plastid | 21.58 | 18.09 |
| EES10354 | Sorghum | plastid | 15.99 | 17.44 |
| OQU89212 | Sorghum | cytosol | 15.61 | 14.49 |
| OQU81040 | Sorghum | peroxisome | 14.84 | 10.77 |
Protein Annotations
| Gene3D:3.40.50.410 | MapMan:35.2 | EntrezGene:8065966 | UniProt:C5YBP8 | EnsemblPlants:EES11757 | ProteinID:EES11757 |
| ProteinID:EES11757.1 | InterPro:IPR002035 | InterPro:IPR036465 | PFAM:PF00092 | PFAM:PF14624 | PFscan:PS50234 |
| PANTHER:PTHR10579 | PANTHER:PTHR10579:SF64 | SMART:SM00327 | EnsemblPlantsGene:SORBI_3006G009000 | SUPFAM:SSF53300 | unigene:Sbi.1127 |
| UniParc:UPI0001A87182 | InterPro:VWF_A | InterPro:Vwaint_dom | RefSeq:XP_002447429.1 | SEG:seg | InterPro:vWFA_dom_sf |
Description
hypothetical protein
Coordinates
chr6:-:1325272..1327204
Molecular Weight (calculated)
55728.5 Da
IEP (calculated)
4.545
GRAVY (calculated)
-0.229
Length
519 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFNDDEPII PPSNSGPRPT PIVPGRVQLV SKNNNMAPLE ENTQKVLLEL TGGDSTSDRS GLDLVAVLDV SGSMQGEKID KMKTAMKFVV KKLSSIDRLS
101: IVTFMDTATR ICPLRQVTDA SQPELLGLID ALNPGGNTNI TDGLQTGLKV LADRNLSSGR VVGVMLMSDG QQNRGGNAAD VKIGNAPVYT FGFGADYDPT
201: VLNAVARNSM GGTFSVVNDV DKLSMAFSQC LAGLLTVVVQ DLTVTVTPVE DESTIQKVAA GNYPQTQDAG SVTVAFGDLY SKEVRKLIVD LLLPAIDTER
301: GADILEVTYA YKTAGKLFDA PPATVTVRRS GSSFPADDPP VDVVKEEARL QTATMIKQAR TMADGKKLGD ALDKLVEAQN ALGDVPVADP YDDPLLDALR
401: KELQELQKLM KSPAVYEQQG RPYAMSSETS HDRQRFAARG DMEKNRLFAT PRMDKYLEQA KKFDEDPAAP LPPADVDEKE EVAANPLAPL AGPITFYIQA
501: AVQALQAIEK LINNGAKAV
101: IVTFMDTATR ICPLRQVTDA SQPELLGLID ALNPGGNTNI TDGLQTGLKV LADRNLSSGR VVGVMLMSDG QQNRGGNAAD VKIGNAPVYT FGFGADYDPT
201: VLNAVARNSM GGTFSVVNDV DKLSMAFSQC LAGLLTVVVQ DLTVTVTPVE DESTIQKVAA GNYPQTQDAG SVTVAFGDLY SKEVRKLIVD LLLPAIDTER
301: GADILEVTYA YKTAGKLFDA PPATVTVRRS GSSFPADDPP VDVVKEEARL QTATMIKQAR TMADGKKLGD ALDKLVEAQN ALGDVPVADP YDDPLLDALR
401: KELQELQKLM KSPAVYEQQG RPYAMSSETS HDRQRFAARG DMEKNRLFAT PRMDKYLEQA KKFDEDPAAP LPPADVDEKE EVAANPLAPL AGPITFYIQA
501: AVQALQAIEK LINNGAKAV
001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
Arabidopsis Description
T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.