CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05180	Sorghum	mitochondrion	92.01	84.28
EES11757	Sorghum	cytosol	88.76	57.8
Zm00001d024014_P001	Maize	cytosol	77.51	52.09
Zm00001d024886_P002	Maize	cytosol	78.4	51.36
TraesCS2B01G026900.1	Wheat	cytosol	44.38	25.04
KXG20893	Sorghum	cytosol, plastid	39.65	21.93
OQU79988	Sorghum	cytosol	25.15	15.71
OQU90497	Sorghum	cytosol	23.37	15.34
EER91509	Sorghum	nucleus	22.49	13.01
EER91508	Sorghum	cytosol, plastid	23.67	12.36
EER95529	Sorghum	nucleus	23.67	12.31
OQU85324	Sorghum	mitochondrion	25.15	12.09
OQU91675	Sorghum	cytosol	21.89	11.9
OQU81931	Sorghum	mitochondrion	23.37	11.33
OQU75754	Sorghum	mitochondrion, plastid	20.71	11.31
EER91513	Sorghum	mitochondrion	23.37	11.22
EER87790	Sorghum	endoplasmic reticulum, extracellular	20.71	11.01
OQU93258	Sorghum	cytosol	22.49	10.83
OQU93256	Sorghum	mitochondrion	21.89	10.6
OQU85917	Sorghum	nucleus	22.78	10.45
KXG25767	Sorghum	mitochondrion	12.72	9.19
TraesCS6B01G057500.1	Wheat	cytosol	11.54	7.74
EES10354	Sorghum	plastid	10.65	7.56
OQU81040	Sorghum	peroxisome	15.68	7.41
OQU89212	Sorghum	cytosol	9.47	5.72

Protein Annotations

EnsemblPlants:KXG38506	EnsemblPlantsGene:SORBI_3001G245200	Gene3D:3.40.50.410	InterPro:IPR036465	InterPro:Vwaint_dom	InterPro:vWFA_dom_sf
PANTHER:PTHR10579	PANTHER:PTHR10579:SF64	PFAM:PF14624	ProteinID:KXG38506	ProteinID:KXG38506.1	SEG:seg
UniParc:UPI00081AE6FC	UniProt:A0A1B6QKR2	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:25613182..25614229

Molecular Weight (calculated)

36790.4 Da

IEP (calculated)

4.489

GRAVY (calculated)

-0.337

Length

338 amino acids

Sequence
(BLAST)

001: MLMSDGQQNH GRNAADVKIS NAPVYTFGFG AHYDPAVLNA VARNNMGGTF SVVNDCLAGL LTVLVQDLTV TVTPVEDEST VATGNYPQTQ DAGSVTVTFG
101: DLYSKEVRKL IVDLLPAIDT ERGADILEVT YTYKTVGKLF DGHCAAERHA FPADDPPMDV VKEETRLQTT TATTIKQART MVDGKKLDDA LDKLVEAQNA
201: LGDVPVADPY DDPLLDALRK ELQELQKLMK SPAVYEQQGR PYAMSSETSH ARQWFAARGD MENNRLFATP RMDKHLEQAK KFDEDPAASL PSADADEKEE
301: VTASPLTPLA GPITFYIQAA VQTLQAIEKL INNGAKAV

Best Arabidopsis Sequence Match ( AT3G54780.1 )
(BLAST)

001: MVSKWKKMKL ALSLNLCNYL PRTLEEEPPS LALNSAETLS DAALLSPLNW PMTPTPSSYR RRLSRSSSKS SKTCSICLNK MKEGCGHAIF TAECSHMFHF
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR

Arabidopsis Description

Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN98]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.