CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027622_P001	Maize	mitochondrion	92.84	93.64
TraesCS5A01G512800.2	Wheat	mitochondrion	76.65	75.67
HORVU4Hr1G084340.1	Barley	mitochondrion	76.65	75.67
TraesCS4D01G339200.1	Wheat	mitochondrion	76.5	75.53
TraesCS4B01G344100.1	Wheat	mitochondrion	76.36	75.39
Os03t0142500-01	Rice	plasma membrane	74.21	74.64
EER91513	Sorghum	mitochondrion	56.45	55.97
GSMUA_Achr11P...	Banana	mitochondrion	49.0	54.72
GSMUA_Achr5P20480_001	Banana	mitochondrion	49.0	53.94
GSMUA_Achr1P03470_001	Banana	mitochondrion, plastid	48.42	52.81
OQU85324	Sorghum	mitochondrion	51.72	51.35
VIT_13s0019g04440.t01	Wine grape	endoplasmic reticulum	51.43	50.56
VIT_06s0004g02630.t01	Wine grape	mitochondrion, nucleus	52.29	50.07
OQU81931	Sorghum	mitochondrion	48.71	48.78
GSMUA_Achr11P...	Banana	mitochondrion	37.54	48.7
CDY72156	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	37.39	48.42
CDY31517	Canola	extracellular, mitochondrion, plastid	41.4	48.33
CDY67781	Canola	cytosol	36.53	48.2
PGSC0003DMT400059986	Potato	nucleus	50.0	48.01
Solyc05g056140.2.1	Tomato	nucleus	49.86	47.8
AT5G60710.1	Thale cress	extracellular, mitochondrion, plastid	47.99	47.59
Bra005066.1-P	Field mustard	mitochondrion	44.7	47.56
CDY52708	Canola	extracellular, mitochondrion, plastid	40.97	47.51
CDY32819	Canola	cytosol	40.83	47.19
AT2G38970.1	Thale cress	mitochondrion	46.56	46.97
CDX74871	Canola	mitochondrion	40.83	46.72
Bra020234.1-P	Field mustard	mitochondrion	46.42	46.62
CDX91506	Canola	mitochondrion	40.54	46.55
Bra030712.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	40.69	46.48
OQU85917	Sorghum	nucleus	48.14	45.59
Bra002456.1-P	Field mustard	mitochondrion, plastid	45.7	45.57
AT1G08050.1	Thale cress	plastid	41.55	45.24
PGSC0003DMT400020896	Potato	mitochondrion, plastid	47.28	45.02
Solyc11g069600.1.1	Tomato	plastid	47.13	44.88
AT3G54780.4	Thale cress	endoplasmic reticulum, extracellular, plastid	42.55	43.55
GSMUA_Achr2P11780_001	Banana	golgi	29.08	43.01
EER91509	Sorghum	nucleus	35.96	42.98
EER91508	Sorghum	cytosol, plastid	39.83	42.97
EER95529	Sorghum	nucleus	39.54	42.46
CDX93597	Canola	cytosol	38.54	41.84
CDX95099	Canola	cytosol	33.09	41.1
OQU91675	Sorghum	cytosol	36.53	41.0
OQU79988	Sorghum	cytosol	31.52	40.67
OQU90497	Sorghum	cytosol	29.66	40.19
OQU93258	Sorghum	cytosol	39.97	39.74
EES11757	Sorghum	cytosol	20.77	27.94
KXG20893	Sorghum	cytosol, plastid	20.49	23.4
OQU89212	Sorghum	cytosol	18.62	23.26
KXG25767	Sorghum	mitochondrion	15.19	22.65
EES10354	Sorghum	plastid	15.19	22.27
EES05180	Sorghum	mitochondrion	11.6	21.95
KXG38506	Sorghum	cytosol	10.6	21.89
EER87790	Sorghum	endoplasmic reticulum, extracellular	19.48	21.38
Bra018663.1-P	Field mustard	nucleus	38.25	20.24
OQU75754	Sorghum	mitochondrion, plastid	17.62	19.87
OQU81040	Sorghum	peroxisome	19.05	18.6

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	EntrezGene:8085504	UniProt:A0A1Z5SBR3	InterPro:IPR001841
InterPro:IPR002035	InterPro:IPR013083	InterPro:IPR036465	EnsemblPlants:OQU93256	ProteinID:OQU93256	ProteinID:OQU93256.1
PFAM:PF13768	PFAM:PF14624	PFAM:PF17123	PFscan:PS50089	PFscan:PS50234	PANTHER:PTHR10579
PANTHER:PTHR10579:SF54	SMART:SM00184	SMART:SM00327	EnsemblPlantsGene:SORBI_3001G508466	SUPFAM:SSF53300	SUPFAM:SSF57850
UniParc:UPI0001A830DB	InterPro:VWF_A	InterPro:Vwaint_dom	RefSeq:XP_002468529.1	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:77643761..77647491

Molecular Weight (calculated)

76218.6 Da

IEP (calculated)

7.166

GRAVY (calculated)

-0.256

Length

698 amino acids

Sequence
(BLAST)

001: MAAAWARAKR ALATCLCVSF PARQRAIEDA PPPPAVEAPS SVSEDKLESA SVSVRRLTSF GSRSSQQKTC AICLGGMRSG QGHALFTAEC SHKFHFHCIS
101: SNIKHGNLIC PICRAEWKEL PGAQPADANY GRARVNPLNW PQDEGHMAVV RRLSHTYSGN LQEHLPFFRT LEAGIFNDDE HIDLQSDMND EHNAITGSVK
201: IKAYSEFPAI EQSVTKEIFA ILIHLRAPKS SHSASSRAPL DLVTVLDVSG SMAGTKIALL KNAMSFVIQT LGPNDRLSVI AFSSTARRLF PLRRMTLAGR
301: QQALQAVSSL VASGGTNIAD GLKKGAKVIE DRRLKNPVCS IILLSDGQDT YTLPSDRNLL DYSALVPPSI LPGTGHHVQI HTFGFGSDHD SAAMHAIAEI
401: SSGTFSFIDA EGSIQDGFAQ CIGGLLSVVV KEMRLGIECV DNGVLLTSIK SGGYTSQVAE NGRGGSVDIG DLYADEERGF LLTLHVPPAQ GQTVLIKPSC
501: TYHDAITMEN IEVHGEEVRI QRPEHHVDCK MSPEVEREWH RVQATEDMSA ARAAAEVGAF SQAVAILEAR RRILESQAAQ SSDNQCLALM TELREMQERV
601: ENRRRYEESG RAFMLAGLSS HSWQRATARG DSTEITTTIH TYQTPTMVDM LQRSQILVAP TADMLNRSPT VAPSQRSPHR FSRSSRSRTT KSFSEQLL

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.