CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G484700.1	Wheat	cytosol, unclear	40.26	46.95
TraesCS7D01G010200.1	Wheat	cytosol	40.26	46.95
TraesCS7A01G010300.1	Wheat	nucleus, unclear	40.1	46.76
HORVU7Hr1G001030.5	Barley	cytosol	39.61	46.1
TraesCS5D01G016400.1	Wheat	cytosol	34.7	43.8
TraesCS5B01G009400.1	Wheat	cytosol	33.72	43.1
TraesCS5A01G011500.1	Wheat	cytosol	34.86	42.6
EES11757	Sorghum	cytosol	36.17	42.58
Os12t0431700-00	Rice	cytosol	14.4	42.51
TraesCS5B01G009600.1	Wheat	cytosol	36.5	42.48
TraesCS5D01G016600.1	Wheat	cytosol	36.33	42.45
TraesCS5A01G011700.1	Wheat	cytosol	36.17	42.02
HORVU5Hr1G001450.1	Barley	cytosol	35.84	41.71
HORVU5Hr1G070100.1	Barley	cytosol	35.84	41.71
HORVU5Hr1G001270.2	Barley	cytosol	24.22	41.23
TraesCS7D01G434400.1	Wheat	cytosol	34.86	40.88
TraesCS3D01G516600.1	Wheat	cytosol	34.7	40.61
TraesCS3B01G577600.1	Wheat	cytosol	34.53	40.27
KXG38506	Sorghum	cytosol	21.93	39.65
EES05180	Sorghum	mitochondrion	23.9	39.57
TraesCS7B01G344600.1	Wheat	mitochondrion	21.6	37.61
HORVU0Hr1G036570.1	Barley	mitochondrion	22.09	35.34
OQU90497	Sorghum	cytosol	20.95	24.85
OQU79988	Sorghum	cytosol	21.28	24.03
EER91509	Sorghum	nucleus	22.59	23.63
EER87790	Sorghum	endoplasmic reticulum, extracellular	22.91	22.01
EER95529	Sorghum	nucleus	23.4	22.0
EER91508	Sorghum	cytosol, plastid	22.91	21.64
OQU91675	Sorghum	cytosol	21.93	21.54
OQU93256	Sorghum	mitochondrion	23.4	20.49
OQU93258	Sorghum	cytosol	23.24	20.23
OQU85324	Sorghum	mitochondrion	23.24	20.2
OQU81931	Sorghum	mitochondrion	22.26	19.51
EES10354	Sorghum	plastid	15.06	19.33
EER91513	Sorghum	mitochondrion	22.26	19.32
OQU85917	Sorghum	nucleus	21.6	17.91
OQU75754	Sorghum	mitochondrion, plastid	17.68	17.45
KXG25767	Sorghum	mitochondrion	13.26	17.31
OQU89212	Sorghum	cytosol	12.6	13.77
OQU81040	Sorghum	peroxisome	13.75	11.75

Protein Annotations

EnsemblPlants:KXG20893	EnsemblPlantsGene:SORBI_3010G267100	Gene3D:3.40.50.410	InterPro:IPR002035	InterPro:IPR036465	InterPro:VWF_A
InterPro:Vwaint_dom	InterPro:vWFA_dom_sf	ncoils:Coil	PANTHER:PTHR10579	PANTHER:PTHR10579:SF64	PFAM:PF00092
PFAM:PF14624	PFscan:PS50234	ProteinID:KXG20893	ProteinID:KXG20893.1	SEG:seg	SMART:SM00327
SUPFAM:SSF53300	UniParc:UPI0007F1A1FB	UniProt:A0A194YLR3	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr10:-:60201097..60203514

Molecular Weight (calculated)

66087.0 Da

IEP (calculated)

5.252

GRAVY (calculated)

-0.208

Length

611 amino acids

Sequence
(BLAST)

001: MYIYMCSHYW CYQAVNLQIP SCPLLIRAAS AGRSRKPGTK SSAPNKMFND DEEPIAPASN AGKQVRGFSD VGKASVKPYY PKEAPLGAST VRVLLDVSSS
101: SSTAGRAALD LVVVLDVSGS MRDFGRLDKL KSAMRFIIKK LAPMDRLSVV TFNGGATREC PLRAMSEDAV PVLTDIVDGL VARGGTNIEA GLKMGLQVLD
201: GRRYTGARTA GVILMSDGEQ NSGDATRVRN PQNYPVYTLS FGSNADMNLL QKLAGGGGTY NPVLDSGGMS MLDVFSQLMA GLLTVVVRDL YLILSKPAAV
301: VVAATHPDDH DLDKIVKVDP GDFRQETDAQ SGTVTVKFGD LFSGEVRKVV VELSLRETSS SDYDAEILDV EVSYPNEQGE RKKLVGQTLH VKRTSTASDN
401: GGTTPELEAE LLRRQHAVSI RAARLLADDE KLGAARARLQ KAQRELEGVL EETNPMVAVL RTELQQLMDC MRSEDLYKTK GKPYALAVEL SHARQRFAAR
501: GVNDGVRLFA TPRMDAYLEQ ARKFAEDPSA PLPTADEDAA VEPTGADVVA EDPNNAPLPA TGDADADVEV EIAKVVDDAP SKVVYYMQVA VLLLKGIENI
601: VKRLWERLGM A

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.