Factsheet for TraesCS5D01G016600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G009600.1	Wheat	cytosol	97.71	97.33
TraesCS5A01G011700.1	Wheat	cytosol	95.79	95.25
HORVU5Hr1G070100.1	Barley	cytosol	90.82	90.48
HORVU5Hr1G001450.1	Barley	cytosol	90.82	90.48
TraesCS5D01G016400.1	Wheat	cytosol	79.54	85.95
Os12t0431700-00	Rice	cytosol	28.11	71.01
TraesCS7D01G010200.1	Wheat	cytosol	59.85	59.73
TraesCS7D01G434400.1	Wheat	cytosol	53.92	54.13
TraesCS3D01G516600.1	Wheat	cytosol	53.35	53.45
Zm00001d024886_P002	Maize	cytosol	40.73	41.28
Zm00001d024014_P001	Maize	cytosol	39.01	40.56
KXG20893	Sorghum	cytosol, plastid	42.45	36.33
TraesCS7D01G418800.1	Wheat	cytosol, peroxisome, plasma membrane	33.65	24.18
TraesCS6D01G009300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	33.46	23.65
TraesCS5D01G348200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	25.24	23.24
TraesCS5D01G472700.1	Wheat	cytosol	26.0	22.67
TraesCS1D01G433500.1	Wheat	cytosol	24.86	22.07
TraesCS2D01G459400.1	Wheat	mitochondrion	21.22	21.18
TraesCS4D01G351600.1	Wheat	plastid	21.99	20.28
TraesCS2D01G361900.1	Wheat	mitochondrion	26.77	20.23
TraesCS4D01G339200.1	Wheat	mitochondrion	27.34	20.23
TraesCS6D01G207700.2	Wheat	mitochondrion	26.96	19.86
TraesCS2D01G357400.1	Wheat	cytosol, nucleus, peroxisome	24.47	19.81
TraesCS1D01G144900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome, plastid	25.81	19.77
TraesCS4D01G339300.1	Wheat	cytosol	27.92	19.49
TraesCS6D01G360000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	25.43	18.02
TraesCS5D01G016700.1	Wheat	mitochondrion	23.14	14.09
TraesCS2D01G043700.1	Wheat	peroxisome	18.93	12.98
TraesCS5D01G182800.1	Wheat	cytosol, plastid	13.96	12.85

Protein Annotations

EnsemblPlants:TraesCS5D01G016600.1	EnsemblPlantsGene:TraesCS5D01G016600	Gene3D:3.40.50.410	InterPro:IPR002035	InterPro:IPR036465	InterPro:VWF_A
InterPro:Vwaint_dom	InterPro:vWFA_dom_sf	ncoils:Coil	PANTHER:PTHR10579	PANTHER:PTHR10579:SF64	PFAM:PF00092
PFAM:PF14624	PFscan:PS50234	SEG:seg	SMART:SM00327	SUPFAM:SSF53300	MapMan:35.2

Description

No Description!

Coordinates

chr5D:+:9471005..9472668

Molecular Weight (calculated)

55769.0 Da

IEP (calculated)

4.685

GRAVY (calculated)

-0.259

Length

523 amino acids

Sequence
(BLAST)

001: MALFHDDEKP SSPNNAGSKD GLVTMAIPAY SRKDVGLTKD TVTAMVEISA TSSAAMREGL DLVAVLDVSG SMGGDKIQSV KKALQFVIMK LTPVDRLSIV
101: TFDSTARSLN PLRSMTQAAQ TDLKAIVNRL AAGGGTDIKA GLDLGLAVLG GRVHTESRTP NIFLMSDGQT SGDPRQVNPG EVAVYTFGFG AGTDHKLLSD
201: LAKKSTGGTY SAVPDGTNLS APFSQLLGGL LTVVAQDVQL TLEPNNADGD LDKMTVAPGT DYTTTTDGKS GLITIKFGTL FSGEARKVAV NFTLRDSDET
301: EEYDATLAEA RHSYAGQKTR QPPENILIVR TPNPSPADPS SAGASQRTVQ AEELRRLHAN TIGAASLLAD AEKLAEARDK IMDAQNAVED IMLDDGERMI
401: NALRAELLQL LTFMESQALY NERGHPYALA TIASHGRQRT AGRGDEGEVI SLYVTPRMIA YLEQAKRFEE NPEEPVPTAD DDVEEEIKND PFGTIAAPLA
501: LYLDTAIQAL QSIKKVLAGA SKR

Best Arabidopsis Sequence Match ( AT3G54780.1 )
(BLAST)

001: MVSKWKKMKL ALSLNLCNYL PRTLEEEPPS LALNSAETLS DAALLSPLNW PMTPTPSSYR RRLSRSSSKS SKTCSICLNK MKEGCGHAIF TAECSHMFHF
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR

Arabidopsis Description

Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN98]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.