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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G016600.1 Wheat cytosol 97.33 97.71
TraesCS5A01G011700.1 Wheat cytosol 94.48 94.3
HORVU5Hr1G070100.1 Barley cytosol 90.86 90.86
HORVU5Hr1G001450.1 Barley cytosol 90.86 90.86
TraesCS5B01G009400.1 Wheat cytosol 77.71 85.36
Os12t0431700-00 Rice cytosol 28.0 71.01
TraesCS3B01G577600.1 Wheat cytosol 53.9 54.01
TraesCS7B01G344600.1 Wheat mitochondrion 32.57 48.72
KXG20893 Sorghum cytosol, plastid 42.48 36.5
TraesCS2B01G026900.1 Wheat cytosol 32.19 28.21
TraesCS5B01G284200.1 Wheat cytosol 24.0 25.15
TraesCS2B01G515000.1 Wheat cytosol 23.81 23.67
TraesCS7B01G327100.1 Wheat cytosol, peroxisome, plasma membrane 32.57 23.49
TraesCS5B01G338500.1 Wheat cytosol 22.86 23.44
TraesCS3B01G425600.1 Wheat cytosol 17.14 21.9
TraesCS6B01G057500.1 Wheat cytosol 20.76 21.63
TraesCS1B01G456800.1 Wheat cytosol 24.76 21.56
TraesCS1B01G164800.1 Wheat cytosol, nucleus, peroxisome 24.95 20.6
TraesCS4B01G344100.1 Wheat mitochondrion 27.24 20.23
TraesCS2B01G377900.1 Wheat cytosol 24.38 19.81
TraesCS6B01G254400.1 Wheat mitochondrion 26.67 19.72
TraesCS2B01G382300.1 Wheat mitochondrion 25.9 19.57
TraesCS4B01G344200.1 Wheat cytosol 26.29 19.14
TraesCS4B01G358100.1 Wheat plastid 25.71 18.96
TraesCS6B01G413100.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 24.95 17.73
TraesCS5B01G009700.1 Wheat mitochondrion 24.0 14.67
TraesCS5B01G176000.2 Wheat mitochondrion 13.9 13.85
TraesCS2B01G057300.1 Wheat peroxisome 18.29 12.47
Protein Annotations
EnsemblPlants:TraesCS5B01G009600.1EnsemblPlantsGene:TraesCS5B01G009600Gene3D:3.40.50.410InterPro:IPR002035InterPro:IPR036465InterPro:VWF_A
InterPro:Vwaint_domInterPro:vWFA_dom_sfncoils:CoilPANTHER:PTHR10579PANTHER:PTHR10579:SF64PFAM:PF00092
PFAM:PF14624PFscan:PS50234SEG:segSMART:SM00327SUPFAM:SSF53300MapMan:35.2
Description
No Description!
Coordinates
chr5B:+:9416859..9418764
Molecular Weight (calculated)
56213.4 Da
IEP (calculated)
4.625
GRAVY (calculated)
-0.295
Length
525 amino acids
Sequence
(BLAST)
001: MALFHDDEKP SSPNNAGSKD GLVTMAIPAY NRKDVGLTKD TVTAMVEISA TSSAAMREGL DLVAVLDVSG SMGGDKIESV KKALQFVIMK LTPVDRLSIV
101: TFDSTARSLN PLRSMTQAAQ TDLKAIVNRL AAGGGTDIKA GLDLGLAVLA GRVHTDSRTP NIFLMSDGQT SGDPRQVNPG EVAVYTFGFG AGTDHKLLSD
201: LAKKSTGGTY SAVPDGTNLS APFSQLLGGL LTVVAQDVQL TLEPNNSDGD LDKMTVAPGT DYTTTTDDKS GLITIKFGTL FSGEARKVAV NFTLRDSDET
301: EEYDATLAEA RHSYAGQKTR QPPENILIVR TPNPSPADPS TAGASQRTVQ AEELRRLHAN TIGAASLLAD AEKLEEARDK IMDAQNAVED IMLDDGEKMV
401: NALRAELLQL LTFMESQALY NERGHPYALA TIASHGRQRT AGRGDEGEVI SLYVTPRMIA YLEQAKRFEE NPEEPVPTAD DDVEEEIRND PFGTIAAPLA
501: LYLDTAIQAL QSIKKVLAGA SQRKR
Best Arabidopsis Sequence Match ( AT5G60710.1 )
(BLAST)
001: MGSKWRKAKV ALGLNLCLYV PKTLEDSSPP RRSDDAVSLS PVIVQRPSTP TPSSSGLRLP RSMSKSSSKK TCAICLTAMK AGQGHAIFTA ECSHSFHFQC
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR
Arabidopsis Description
Retroelement pol polyprotein-like [Source:UniProtKB/TrEMBL;Acc:Q9FF49]
SUBAcon: [mitochondrion,plastid,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.