Factsheet for TraesCS4B01G358100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G351600.1	Wheat	plastid	77.11	96.83
HORVU4Hr1G086310.1	Barley	cytosol	31.04	89.84
TraesCS3B01G425600.1	Wheat	cytosol	50.7	87.83
Os04t0266700-00	Rice	cytosol	10.96	68.42
Os08t0126100-00	Rice	nucleus	53.93	54.55
TraesCS5B01G338500.1	Wheat	cytosol	39.04	54.3
TraesCS1B01G456800.1	Wheat	cytosol	45.79	54.06
TraesCS5B01G284200.1	Wheat	cytosol	37.64	53.49
TraesCS1B01G164800.1	Wheat	cytosol, nucleus, peroxisome	44.8	50.16
TraesCS2B01G515000.1	Wheat	cytosol	36.8	49.62
Os08t0126000-00	Rice	plastid	48.74	45.84
TraesCS2B01G377900.1	Wheat	cytosol	40.87	45.05
TraesCS4B01G344200.1	Wheat	cytosol	44.8	44.24
TraesCS2B01G382300.1	Wheat	mitochondrion	36.8	37.7
TraesCS6B01G254400.1	Wheat	mitochondrion	37.5	37.61
TraesCS4B01G344100.1	Wheat	mitochondrion	35.39	35.64
TraesCS6B01G413100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	34.83	33.56
TraesCS5B01G009400.1	Wheat	cytosol	18.4	27.41
TraesCS5B01G009600.1	Wheat	cytosol	18.96	25.71
TraesCS3B01G577600.1	Wheat	cytosol	18.82	25.57
TraesCS2B01G057300.1	Wheat	peroxisome	22.89	21.17
TraesCS5B01G176000.2	Wheat	mitochondrion	14.89	20.11
TraesCS2B01G026900.1	Wheat	cytosol	16.29	19.37
TraesCS6B01G057500.1	Wheat	cytosol	13.62	19.25
TraesCS7B01G344600.1	Wheat	mitochondrion	9.41	19.09
TraesCS7B01G327100.1	Wheat	cytosol, peroxisome, plasma membrane	17.28	16.9
TraesCS5B01G009700.1	Wheat	mitochondrion	18.68	15.48

Protein Annotations

EnsemblPlants:TraesCS4B01G358100.1	EnsemblPlantsGene:TraesCS4B01G358100	Gene3D:3.40.50.410	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR036465
InterPro:VWF_A	InterPro:Vwaint_dom	InterPro:Znf_RING	InterPro:vWFA_dom_sf	PANTHER:PTHR10579	PANTHER:PTHR10579:SF72
PFAM:PF00092	PFAM:PF14624	PFscan:PS50089	PFscan:PS50234	SEG:seg	SMART:SM00184
SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	TIGR:cd16448	MapMan:35.1	:

Description

No Description!

Coordinates

chr4B:+:648514058..648516196

Molecular Weight (calculated)

75292.1 Da

IEP (calculated)

6.769

GRAVY (calculated)

-0.190

Length

712 amino acids

Sequence
(BLAST)

001: MASAGQRCAG CYGGIGRLEA AFSSECAHTF HPLCVSGAHT CPSCSAFWSF TPTFQPSPFQ PQPARMPPPV RHDAAAASRS ACGVCKCAFV YGSPTFTSEC
101: QHRFHLACAT GSVCPVCNAR WPYQVSCYPY LHPYQFPPPP PMPRPMPMWT SPFVDQPSPA VYDDDEPLEP LAAQGAPLDD WDLVQDAANG GGRLVLDAHC
201: EHPAVARGEP HDSFVVLVHA KAPGAATAAA AEQTRTPLDL VTVLDVSGSM TGRKIALLKK AMDFVVDQLG PADRLSVVAF STDARRPIPL TRMSDAGKVK
301: AKGAVQLLMA NGGTNILKGL TEAAKVLDGR RHKNAVASVI LLSDGQDTYN LGGGGGGYGY GSVSYSKNYR ALVPGSLLSG AGHRSTPVHT FGFGGDHDSS
401: AMHTIAEETG GTFSFIEDEK VVQDSFAQCI GGLLSVVLQE ALITVKCVHP VRVRAVKSGR YDSSIDAYAR SASVDVGELY ADEERRFLLL VDVPKAGDAD
501: EVTQIMKVTC TYRDTSTGQV VDVAGEDVAV QRPVEVAKDQ QPSMEVAREK FRAEATEDIA AARAAAERGE YAEAARILDR RQEALLPALA DDARCKALVE
601: ELRELSTRVA SRREYEKSGR ACILTGYSSH AQQRAASACV AGAGGGYRCP PPPGGAGGMG MGGAASVFGF GAAGAYATPA MQMMVGASRQ VREQQQQQPA
701: TLKRKSGSDG VN

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.