Factsheet for Os08t0126100-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0266700-00	Rice	cytosol	13.78	85.09
HORVU4Hr1G086310.1	Barley	cytosol	23.58	67.48
Os08t0126000-00	Rice	plastid	65.91	61.29
TraesCS3B01G425600.1	Wheat	cytosol	34.94	59.85
TraesCS3A01G393700.1	Wheat	cytosol	44.32	59.2
TraesCS4D01G351600.1	Wheat	plastid	46.45	57.67
TraesCS4B01G358100.1	Wheat	plastid	54.55	53.93
TraesCS1A01G421500.1	Wheat	plastid	46.73	52.31
Os12t0203500-00	Rice	vacuole	36.93	47.45
Os03t0142500-01	Rice	plasma membrane	37.36	37.9
Os04t0508800-01	Rice	plasma membrane	37.36	37.15
Os02t0619600-01	Rice	mitochondrion	37.36	37.09
Os10t0464800-00	Rice	nucleus	48.72	36.14
Os12t0431700-00	Rice	cytosol	9.94	33.82
Os02t0806700-01	Rice	nucleus	34.23	33.33
Os11t0650600-00	Rice	cytosol	20.45	25.31
Os11t0687100-01	Rice	nucleus	21.73	24.17
Os10t0464500-00	Rice	extracellular, plasma membrane	16.05	23.25
Os03t0403600-01	Rice	cytosol, extracellular	13.64	23.08
Os04t0101800-01	Rice	cytosol, mitochondrion, peroxisome, plastid	22.3	22.79
Os11t0650500-00	Rice	cytosol	18.89	22.5
Os06t0578100-00	Rice	nucleus	20.74	21.92
Os11t0679000-00	Rice	cytosol	17.9	21.72
Os06t0578700-01	Rice	golgi	17.19	20.79
Os01t0640200-00	Rice	cytosol	18.47	20.77
Os11t0687200-02	Rice	golgi	17.47	20.57
Os09t0298500-01	Rice	nucleus	15.2	20.11

Protein Annotations

EntrezGene:107275357	Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	ProteinID:BAD08848.1	ProteinID:BAD09262.1
ProteinID:BAT03657.1	ProteinID:EAZ41374.1	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083	InterPro:IPR036465
EnsemblPlantsGene:Os08g0126100	EnsemblPlants:Os08t0126100-00	PFAM:PF00092	PFAM:PF14624	PFscan:PS50089	PFscan:PS50234
PANTHER:PTHR10579	PANTHER:PTHR10579:SF94	UniProt:Q6ZFR3	SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300
SUPFAM:SSF57850	UniParc:UPI000023AC35	InterPro:VWF_A	InterPro:Vwaint_dom	RefSeq:XP_015649164.1	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	SEG:seg	InterPro:vWFA_dom_sf	:	:	:

Description

Hypothetical conserved gene. (Os08t0126100-00)

Coordinates

chr8:-:1515445..1517559

Molecular Weight (calculated)

74568.8 Da

IEP (calculated)

6.552

GRAVY (calculated)

-0.176

Length

704 amino acids

Sequence
(BLAST)

001: MASAGGRCDG CHGDFGLWEP PLTAECSHRF HLHCVVSGAD VCPACNARWT NAPSNPPPQP AGGSTTPFGQ TTGFPMRVRP WSSCDKCRGV IDHSQPTVTS
101: ECSHTFHLRC FSGSVICPAC NARWRDTVAV PNPSPAPPST FFPAGVPAPP PTFSPFWVSQ EYDDDEPVEP PVAAHGGGVA PASNGALVVR THCEHTAVAR
201: SVIRDNFVVL VHAKAPSIAV AEATAAARAP VDLVTVLDVS GSMEGYKLTL LKRAMGFVID KLGPGDRLAV VSFSYNAQRV IRLTRMSDDG KASAKSAMES
301: LAAGGGTNIL KGLVEAAKVF DGRRYRNAVA SVILLSDGQD TYNVNGGWGA SNSKNYSVLV PPSFKRSGDR RLSVHTFGFG TDHDAVAMNA IAEETGGTFS
401: FIENQAVVQD AFAQCIGGLL SVTVQEARIA ITCPHPGVRV RSVKSGRYES LVNGDGRAAS VDVGELYADE ERRFLVFVDV PAAGAGEDVT ELIKVSCTYR
501: DTASRQQMVV AGEHAVVQRP VEVATNTEPS IEVERERFRV EATEDIAAAQ EAAERGAHAA AKAILDRRQE ALARSAPGLA GDARCAALLS ELRELSARVA
601: SRREYEQTGR ACMLAGMSSH AQQRATSVQL FGAAAPTWSM PMCGSAAPPS LSFGGFGGFA TPAMRSMVES SRKRRKGGDG SLSFLDLVRT EEEAGSSDDE
701: KENL

Best Arabidopsis Sequence Match ( AT5G60710.1 )
(BLAST)

001: MGSKWRKAKV ALGLNLCLYV PKTLEDSSPP RRSDDAVSLS PVIVQRPSTP TPSSSGLRLP RSMSKSSSKK TCAICLTAMK AGQGHAIFTA ECSHSFHFQC
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR

Arabidopsis Description

Retroelement pol polyprotein-like [Source:UniProtKB/TrEMBL;Acc:Q9FF49]
SUBAcon: [mitochondrion,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.